RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 INAFM1C9JVW0 142 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 TLX2O43763 284 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 SS18L1O75177 396 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 SLC43A1O75387 559 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 MRPL33O75394 65 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 SLC2A10O95528 541 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 YES1P07947 543 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 CD47Q08722 323 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 CRMP1Q14194 572 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 MAD2L1BPQ15013 274 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 ARMC4Q5T2S8 1044 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 CARD17Q5XLA6 110 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 B3GNT6Q6ZMB0 384 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 CCDC71Q8IV32 467 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 TUSC5Q8IXB3 177 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 ENTHD1Q8IYW4 607 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 CYB561A3Q8NBI2 242 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 SLC37A3Q8NCC5 494 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 NOXO1Q8NFA2 376 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 MBD3L2Q8NHZ7 208 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 ZNF566Q969W8 418 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 SLC25A44Q96H78 314 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 TXNDC15Q96J42 360 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 LRR1Q96L50 414 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 Q96MT0 163 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 ZFP3Q96NJ6 502 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 ZNF385AQ96PM9 386 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 NMNAT3Q96T66 252 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 ALG12Q9BV10 488 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 EMC6Q9BV81 110 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 B3GAT2Q9NPZ5 323 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 PARPBPQ9NWS1 579 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 CLN6Q9NWW5 311 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 H2AFY2Q9P0M6 372 aaPredicted RBP10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 CLEC4AQ9UMR7 237 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 LRCH1Q9Y2L9 728 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 GPR52Q9Y2T5 361 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 LRRC42Q9Y546 428 aa10.66□□□□□ -0.7
SHKBP1-213ENST00000597325 TGP01266 2768 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 PRSS37A4D1T9 235 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 SNTNA6NMZ2 147 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 CENPBD1B2RD01 187 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 E9PLN8 166 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 H7C1C5 153 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 AHCYL1O43865 530 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 TRMUO75648 421 aaKnown RBP10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 TOXO94900 526 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 IL2RAP01589 272 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 AGTR1P30556 359 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 CSNK1A1P48729 337 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 SNRPGP62308 76 aaKnown RBP10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 LCN6P62502 163 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 LGALS3BPQ08380 585 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 CAMK2DQ13557 499 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 MEDAGQ5VYS4 303 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 PLBD1Q6P4A8 553 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 DNM1P34Q6PK57 102 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 C3P1Q6ZMU1 363 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 DOLPP1Q86YN1 238 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 GID4Q8IVV7 300 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 ZIC4Q8N9L1 334 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 C9orf106Q8NAJ2 232 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 SYT14Q8NB59 555 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 OR6N1Q8NGY5 312 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 OR2T4Q8NH00 348 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 FNDC8Q8TC99 324 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 RFKQ969G6 155 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 APH1AQ96BI3 265 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 ZNF775Q96BV0 537 aaPredicted RBP10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 COX4I2Q96KJ9 171 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 OR2M2Q96R28 347 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 SNX18Q96RF0 628 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 VKORC1Q9BQB6 163 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 SYT4Q9H2B2 425 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 RPRD1BQ9NQG5 326 aaKnown RBP10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 ASB6Q9NWX5 421 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 ZNF226Q9NYT6 803 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 DNAJC27Q9NZQ0 273 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 FAM215AQ9Y5M1 114 aa10.65□□□□□ -0.7
SHKBP1-213ENST00000597325 SONP18583 2426 aaKnown RBP10.65□□□□□ -0.71
SHKBP1-213ENST00000597325 ZNF407Q9C0G0 2248 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 NKX2-6A6NCS4 301 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 OR6C65A6NJZ3 312 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 FAM183AA6NL82 134 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 KDM4EB2RXH2 506 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 KRT33AO76009 404 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 F12P00748 615 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 CRHP06850 196 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 PGA4P0DJD7 388 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 PGA3P0DJD8 388 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 TMIGD3P0DMS9 266 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 CRABP1P29762 137 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 CDKN2AP42771 156 aaKnown RBP10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 SELENOPP49908 381 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 SLC25A1P53007 311 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 ISL1P61371 349 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 RPS7P62081 194 aaKnown RBP10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 SIRPAP78324 504 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 TEKQ02763 1124 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 KLHL12Q53G59 568 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms