RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 EFCAB9A8MZ26 197 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 CDC42EP2O14613 210 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 SMAD7O15105 426 aaKnown RBP11.28□□□□□ -0.6
USE1-207ENST00000596136 SSX4O60224 188 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 PTP4A3O75365 173 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 GMNNO75496 209 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 FARS2O95363 451 aaKnown RBP11.28□□□□□ -0.6
USE1-207ENST00000596136 FAM107AO95990 144 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 SERPINA5P05154 406 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 H1F0P07305 194 aaKnown RBP11.28□□□□□ -0.6
USE1-207ENST00000596136 SAGP10523 405 aaPredicted RBP11.28□□□□□ -0.6
USE1-207ENST00000596136 NR2C1P13056 603 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 ZNF26P17031 533 aaPredicted RBP11.28□□□□□ -0.6
USE1-207ENST00000596136 PTDSS1P48651 473 aaKnown RBP11.28□□□□□ -0.6
USE1-207ENST00000596136 ZNF84P51523 738 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 MNAT1P51948 309 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 CTXN1P60606 82 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 MRPS34P82930 218 aaKnown RBP11.28□□□□□ -0.6
USE1-207ENST00000596136 VLDLRP98155 873 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 KRTAP1-1Q07627 177 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 KRTAP21-3Q3LHN1 58 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 FAM205BPQ63HN1 556 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 PODNL1Q6PEZ8 512 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 SLC25A47Q6Q0C1 308 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 OR4K5Q8NGD3 323 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 OR51A7Q8NH64 312 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 ZNF519Q8TB69 540 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 FNDC8Q8TC99 324 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 POM121Q96HA1 1249 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 MS4A3Q96HJ5 214 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 PYURFQ96I23 114 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 DOK1Q99704 481 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 SH3GL3Q99963 347 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 SIAEQ9HAT2 523 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 TMEM5Q9Y2B1 443 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 FAM32AQ9Y421 112 aaKnown RBP11.28□□□□□ -0.6
USE1-207ENST00000596136 UGT2A1Q9Y4X1 527 aa11.28□□□□□ -0.6
USE1-207ENST00000596136 YLPM1P49750 1951 aaKnown RBP11.28□□□□□ -0.6
USE1-207ENST00000596136 TRAV27A0A087WT01 109 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 IGKV1D-43A0A0B4J1Z2 117 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 RNF223E7ERA6 249 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 ARPC2O15144 300 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 RAB36O95755 333 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 MMP7P09237 267 aaPredicted RBP11.27□□□□□ -0.61
USE1-207ENST00000596136 PATE4P0C8F1 98 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 TCN1P20061 433 aaPredicted RBP11.27□□□□□ -0.61
USE1-207ENST00000596136 NPR2P20594 1047 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 GLRXP35754 106 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 OMPP47874 163 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 LIMS1P48059 325 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 EVX1P49640 407 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 PPOXP50336 477 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 NUDT6P53370 316 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 SNRPD2P62316 118 aaKnown RBP11.27□□□□□ -0.61
USE1-207ENST00000596136 MYBPC1Q00872 1141 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 DAG1Q14118 895 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 RAB39AQ14964 217 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 ZBED5Q49AG3 693 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 THEM4Q5T1C6 240 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 C16orf89Q6UX73 402 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 RRM2BQ7LG56 351 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 MEX3DQ86XN8 651 aaKnown RBP11.27□□□□□ -0.61
USE1-207ENST00000596136 DEFB107AQ8IZN7 70 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 ARIH2OSQ8N7S6 290 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 OR13C2Q8NGS9 318 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 NABP1Q96AH0 204 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 TSPAN32Q96QS1 320 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 RHNO1Q9BSD3 238 aa11.27□□□□□ -0.61
USE1-207ENST00000596136 ANK3Q12955 4377 aaKnown RBP11.26□□□□□ -0.61
USE1-207ENST00000596136 IGHV4-30-2A0A087WSY4 118 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 TRBV4-1A0A0J9YWV2 114 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 A6NIZ1 184 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 AHCYL1O43865 530 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 SLC2A10O95528 541 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 CD14P08571 375 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 IGFBP1P08833 259 aaPredicted RBP11.26□□□□□ -0.61
USE1-207ENST00000596136 ITGA2P17301 1181 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 MSX2P35548 267 aaPredicted RBP11.26□□□□□ -0.61
USE1-207ENST00000596136 GPR4P46093 362 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 RAP1BP61224 184 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 RAP1AP62834 184 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 SNTB2Q13425 540 aaKnown RBP11.26□□□□□ -0.61
USE1-207ENST00000596136 SEC23BQ15437 767 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 SLC36A2Q495M3 483 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 GKAP1Q5VSY0 366 aaPredicted RBP11.26□□□□□ -0.61
USE1-207ENST00000596136 FAM27BQ5VT28 67 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 TMEM53Q6P2H8 277 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 VHLLQ6RSH7 139 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 CLEC2AQ6UVW9 174 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 FOXL2NBQ6ZUU3 175 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 Q71RC1 249 aaPredicted RBP11.26□□□□□ -0.61
USE1-207ENST00000596136 SLC16A14Q7RTX9 510 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 FAM122BQ7Z309 247 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 ARHGAP24Q8N264 748 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 C10orf105Q8TEF2 133 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 HTRA1Q92743 480 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 NSL1Q96IY1 281 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 SORCS2Q96PQ0 1159 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 RBP7Q96R05 134 aa11.26□□□□□ -0.61
USE1-207ENST00000596136 GPX7Q96SL4 187 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms