RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 PKP2Q99959 881 aa13.07□□□□□ -0.32
DDX39A-221ENST00000593026 S100A14Q9HCY8 104 aa13.07□□□□□ -0.32
DDX39A-221ENST00000593026 REV1Q9UBZ9 1251 aa13.07□□□□□ -0.32
DDX39A-221ENST00000593026 OAZ3Q9UMX2 235 aa13.07□□□□□ -0.32
DDX39A-221ENST00000593026 UNC79Q9P2D8 2635 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 IGKV1D-43A0A0B4J1Z2 117 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-221ENST00000593026 FAM221AA4D161 298 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 SAC3D1A6NKF1 404 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 DEFB108AA8MXU0 73 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 BHLHE40O14503 412 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 SIAH2O43255 324 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 HRGP04196 525 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 OSMP13725 252 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 PRF1P14222 555 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 HIST1H1CP16403 213 aaKnown RBP13.06□□□□□ -0.32
DDX39A-221ENST00000593026 POU1F1P28069 291 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 NR1H2P55055 460 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 SLC35F1Q5T1Q4 408 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 SLC25A47Q6Q0C1 308 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 SEZ6L2Q6UXD5 910 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 PTCHD4Q6ZW05 846 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 CCDC36Q8IYA8 594 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 LNX2Q8N448 690 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 SLC22A24Q8N4F4 322 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 ICA1LQ8NDH6 482 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 OR4K13Q8NH42 304 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 GABARAPL1Q9H0R8 117 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 SYT4Q9H2B2 425 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 PAPOLBQ9NRJ5 636 aaKnown RBP13.06□□□□□ -0.32
DDX39A-221ENST00000593026 RASSF1Q9NS23 344 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 TMEM38BQ9NVV0 291 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 NPAP1Q9NZP6 1156 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 VSX1Q9NZR4 365 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-221ENST00000593026 BAIAP2Q9UQB8 552 aa13.06□□□□□ -0.32
DDX39A-221ENST00000593026 CRYBG3Q68DQ2 2970 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 FARS2O95363 451 aaKnown RBP13.05□□□□□ -0.32
DDX39A-221ENST00000593026 RENP00797 406 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 OR8G3PP0DMU2 310 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 PAX7P23759 505 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 CDKN2AP42771 156 aaKnown RBP13.05□□□□□ -0.32
DDX39A-221ENST00000593026 CAPZA2P47755 286 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 DAPP51397 102 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 ZNF83P51522 516 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 TUBA1BP68363 451 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 TUBA4AP68366 448 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 MRPS34P82930 218 aaKnown RBP13.05□□□□□ -0.32
DDX39A-221ENST00000593026 NRN1LQ496H8 165 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 LEG1Q6P5S2 330 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 TUBA1AQ71U36 451 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 OR52E2Q8NGJ4 325 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 NANOS1Q8WY41 292 aaKnown RBP13.05□□□□□ -0.32
DDX39A-221ENST00000593026 PLPPR2Q96GM1 343 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 SNX18Q96RF0 628 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 NMNAT3Q96T66 252 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 C1QTNF6Q9BXI9 259 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 CLEC4MQ9H2X3 399 aaPredicted RBP13.05□□□□□ -0.32
DDX39A-221ENST00000593026 RERGLQ9H628 205 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 ESRP2Q9H6T0 727 aaKnown RBP13.05□□□□□ -0.32
DDX39A-221ENST00000593026 MOV10Q9HCE1 1003 aaKnown RBP13.05□□□□□ -0.32
DDX39A-221ENST00000593026 KRT84Q9NSB2 600 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 UGT2A1Q9Y4X1 527 aa13.05□□□□□ -0.32
DDX39A-221ENST00000593026 A0A1W2PPL8 197 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 M0R1B8 84 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 SLC16A7O60669 478 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 HLA-HP01893 362 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 CTLA4P16410 223 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 NPR2P20594 1047 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 CDAP32320 146 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 GUCA1AP43080 201 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-221ENST00000593026 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX39A-221ENST00000593026 PGGHGQ32M88 737 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 DNM1P34Q6PK57 102 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 TMEM108Q6UXF1 575 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 PQLC1Q8N2U9 271 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 PARP8Q8N3A8 854 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 SDR9C7Q8NEX9 313 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 OR4Q3Q8NH05 313 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 HTRA1Q92743 480 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 NUAK2Q9H093 628 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 SEC61A2Q9H9S3 476 aa13.04□□□□□ -0.32
DDX39A-221ENST00000593026 CELSR2Q9HCU4 2923 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 MGRN1O60291 552 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 KHDRBS3O75525 346 aaKnown RBP13.03□□□□□ -0.32
DDX39A-221ENST00000593026 CD79AP11912 226 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 IGFBP5P24593 272 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 PTAFRP25105 342 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 CRABP1P29762 137 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 GRK5P34947 590 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 BSPH1Q075Z2 132 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 ETFDHQ16134 617 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 SGCAQ16586 387 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 GSG1Q2KHT4 349 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 NCMAPQ5T1S8 102 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 KDM4DQ6B0I6 523 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 SLC27A4Q6P1M0 643 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 SLC16A14Q7RTX9 510 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 SKA3Q8IX90 412 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 IQCF1Q8N6M8 205 aa13.03□□□□□ -0.32
DDX39A-221ENST00000593026 HS3ST6Q96QI5 342 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms