RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 LOC100130705A0A1B0GUX0 176 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 OR6C68A6NDL8 312 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 ZNF99A8MXY4 864 aaPredicted RBP11.98□□□□□ -0.49
VMP1-210ENST00000589823 PRR23D1E9PI22 279 aaPredicted RBP11.98□□□□□ -0.49
VMP1-210ENST00000589823 H0YJX3 145 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 DLGAP1O14490 977 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 KHDRBS3O75525 346 aaKnown RBP11.98□□□□□ -0.49
VMP1-210ENST00000589823 RAD51DO75771 328 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 RNF224P0DH78 156 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 PRR23D2P0DMB1 279 aaPredicted RBP11.98□□□□□ -0.49
VMP1-210ENST00000589823 GGT2P36268 569 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 VHLP40337 213 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 FOXG1P55316 489 aaPredicted RBP11.98□□□□□ -0.49
VMP1-210ENST00000589823 ARF1P84077 181 aaKnown RBP11.98□□□□□ -0.49
VMP1-210ENST00000589823 ZNF362Q5T0B9 420 aaPredicted RBP11.98□□□□□ -0.49
VMP1-210ENST00000589823 TTC23Q5W5X9 447 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 OR7E24Q6IFN5 339 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 STEAP2Q8NFT2 490 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 FAM81AQ8TBF8 368 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 CYGBQ8WWM9 190 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 NMD3Q96D46 503 aaKnown RBP11.98□□□□□ -0.49
VMP1-210ENST00000589823 ZNF837Q96EG3 531 aaPredicted RBP11.98□□□□□ -0.49
VMP1-210ENST00000589823 HRASLS5Q96KN8 279 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 FOXB1Q99853 325 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 USB1Q9BQ65 265 aaKnown RBP11.98□□□□□ -0.49
VMP1-210ENST00000589823 RASSF4Q9H2L5 321 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 FN3KQ9H479 309 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 FKBP7Q9Y680 259 aa11.98□□□□□ -0.49
VMP1-210ENST00000589823 IGKV1D-43A0A0B4J1Z2 117 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 A0A1W2PPL8 197 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 SLC16A6O15403 523 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 CTLA4P16410 223 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 HOXC12P31275 282 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 UGT2B10P36537 528 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 CENPAP49450 140 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 SLC25A1P53007 311 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 SORDQ00796 357 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 TFF3Q07654 80 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 KEAP1Q14145 624 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 TSC22D1Q15714 1073 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 SNCBQ16143 134 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 ANKRD16Q6P6B7 361 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 ZNF813Q6ZN06 617 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 DEPDC4Q8N2C3 294 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 TCEANCQ8N8B7 351 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 C1orf162Q8NEQ5 155 aaPredicted RBP11.97□□□□□ -0.49
VMP1-210ENST00000589823 PROKR2Q8NFJ6 384 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 OR9Q1Q8NGQ5 310 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 OR1K1Q8NGR3 316 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 OR2T4Q8NH00 348 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 TSSK2Q96PF2 358 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 DDOQ99489 341 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 PITX2Q99697 317 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 RACGAP1Q9H0H5 632 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 OR10A4Q9H209 315 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 SEC61A2Q9H9S3 476 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 NDRG4Q9ULP0 352 aaKnown RBP11.97□□□□□ -0.49
VMP1-210ENST00000589823 B9D1Q9UPM9 204 aa11.97□□□□□ -0.49
VMP1-210ENST00000589823 KLF2Q9Y5W3 355 aaPredicted RBP11.97□□□□□ -0.49
VMP1-210ENST00000589823 FAM183AA6NL82 134 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 E9PQ18 207 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 M0R129 80 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 TLX2O43763 284 aaPredicted RBP11.96□□□□□ -0.49
VMP1-210ENST00000589823 PRKYO43930 277 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 SEC14L2O76054 403 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 FARS2O95363 451 aaKnown RBP11.96□□□□□ -0.49
VMP1-210ENST00000589823 SPI1P17947 270 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 NPR2P20594 1047 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 LAP3P28838 519 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 CAPGP40121 348 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 PEX19P40855 299 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 AQP4P55087 323 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 ETFDHQ16134 617 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 GABRA6Q16445 453 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 SGCAQ16586 387 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 PLBD1Q6P4A8 553 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 KLHL24Q6TFL4 600 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 IZUMO2Q6UXV1 221 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 CXXC5Q7LFL8 322 aaKnown RBP11.96□□□□□ -0.49
VMP1-210ENST00000589823 ZBTB46Q86UZ6 589 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 CPOQ8IVL8 374 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 GLB1L2Q8IW92 636 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 OR6V1Q8N148 313 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 C17orf78Q8N4C9 275 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 OR8J1Q8NGP2 316 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 TMEM163Q8TC26 289 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 TRUB1Q8WWH5 349 aaKnown RBP11.96□□□□□ -0.49
VMP1-210ENST00000589823 MUS81Q96NY9 551 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 IL4I1Q96RQ9 567 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 APOL4Q9BPW4 351 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 ADI1Q9BV57 179 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 NMNAT2Q9BZQ4 307 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 ACTR6Q9GZN1 396 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 MED20Q9H944 212 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 HINT3Q9NQE9 182 aaKnown RBP11.96□□□□□ -0.49
VMP1-210ENST00000589823 TMEM38BQ9NVV0 291 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 H2AFY2Q9P0M6 372 aaPredicted RBP11.96□□□□□ -0.49
VMP1-210ENST00000589823 COA3Q9Y2R0 106 aaPredicted RBP11.96□□□□□ -0.49
VMP1-210ENST00000589823 UGT2A1Q9Y4X1 527 aa11.96□□□□□ -0.49
VMP1-210ENST00000589823 FREM1Q5H8C1 2179 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms