RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 STK11Q15831 433 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 ZNF691Q5VV52 312 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 SLC25A47Q6Q0C1 308 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 OR6V1Q8N148 313 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 SETD9Q8NE22 299 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 OR9Q1Q8NGQ5 310 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 OR2T4Q8NH00 348 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 PTP4A1Q93096 173 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 ZNF837Q96EG3 531 aaPredicted RBP13.37□□□□□ -0.27
ATG4D-211ENST00000589753 TSSK2Q96PF2 358 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 NMNAT2Q9BZQ4 307 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 MED20Q9H944 212 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 ZNF226Q9NYT6 803 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 B9D1Q9UPM9 204 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 FKBP7Q9Y680 259 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 NCOA6Q14686 2063 aaPredicted RBP13.36□□□□□ -0.27
ATG4D-211ENST00000589753 DCTN6O00399 190 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 MPZL2O60487 215 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 AGFG2O95081 481 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 ITGA5P08648 1049 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 SPI1P17947 270 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 COX5AP20674 150 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 IGHV1-2P23083 117 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 FOXG1P55316 489 aaPredicted RBP13.36□□□□□ -0.27
ATG4D-211ENST00000589753 IL5RAQ01344 420 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 P2RY6Q15077 328 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 CDSNQ15517 529 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 ETFDHQ16134 617 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 C9orf135Q5VTT2 229 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 ZBTB46Q86UZ6 589 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 CXorf67Q86X51 503 aaPredicted RBP13.36□□□□□ -0.27
ATG4D-211ENST00000589753 ENTHD1Q8IYW4 607 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 PROKR2Q8NFJ6 384 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 UBE2FQ969M7 185 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 MUS81Q96NY9 551 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 HCAR1Q9BXC0 346 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 RACGAP1Q9H0H5 632 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 KCNJ16Q9NPI9 418 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 RASSF1Q9NS23 344 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 ELOVL5Q9NYP7 299 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 TAS2R16Q9NYV7 291 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 RAB26Q9ULW5 256 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 COA3Q9Y2R0 106 aaPredicted RBP13.36□□□□□ -0.27
ATG4D-211ENST00000589753 MYO7BQ6PIF6 2116 aa13.36□□□□□ -0.27
ATG4D-211ENST00000589753 ZNF462Q96JM2 2506 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 IGLV1-36A0A0B4J1U3 117 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 A0A1W2PPL8 197 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 NKX2-6A6NCS4 301 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 ZNF99A8MXY4 864 aaPredicted RBP13.35□□□□□ -0.27
ATG4D-211ENST00000589753 CLDN14O95500 239 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 GYPBP06028 91 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 GNAO1P09471 354 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 CLUP10909 449 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 PYCR1P32322 319 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 CENPAP49450 140 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 SH3BGRP55822 239 aaPredicted RBP13.35□□□□□ -0.27
ATG4D-211ENST00000589753 SNRPGP62308 76 aaKnown RBP13.35□□□□□ -0.27
ATG4D-211ENST00000589753 ARF1P84077 181 aaKnown RBP13.35□□□□□ -0.27
ATG4D-211ENST00000589753 TGFBR3Q03167 851 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 DBPQ10586 325 aaPredicted RBP13.35□□□□□ -0.27
ATG4D-211ENST00000589753 KLHL12Q53G59 568 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 NXNL2Q5VZ03 156 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 USP51Q70EK9 711 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 C8orf59Q8N0T1 100 aaPredicted RBP13.35□□□□□ -0.27
ATG4D-211ENST00000589753 FAM26EQ8N5C1 309 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 ZNF433Q8N7K0 673 aaPredicted RBP13.35□□□□□ -0.27
ATG4D-211ENST00000589753 BBS1Q8NFJ9 593 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 LRRC46Q96FV0 321 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 FOXB1Q99853 325 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 OR51V1Q9H2C8 321 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 GALNT8Q9NY28 637 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 H2AFY2Q9P0M6 372 aaPredicted RBP13.35□□□□□ -0.27
ATG4D-211ENST00000589753 UGT2A1Q9Y4X1 527 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 HSPE1-MOB4S4R3N1 261 aa13.35□□□□□ -0.27
ATG4D-211ENST00000589753 INTS1Q8N201 2190 aaKnown RBP13.35□□□□□ -0.27
ATG4D-211ENST00000589753 RP1L1Q8IWN7 2480 aaPredicted RBP13.34□□□□□ -0.27
ATG4D-211ENST00000589753 CIB4A0PJX0 185 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 FAM171A2A8MVW0 826 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 PRODHO43272 600 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 LYZL6O75951 148 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 GABRB1P18505 474 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 LAP3P28838 519 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 CD79BP40259 229 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 GUCA1AP43080 201 aaPredicted RBP13.34□□□□□ -0.27
ATG4D-211ENST00000589753 GLO1Q04760 184 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 FBXL19-AS1Q494R0 122 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 SLC25A30Q5SVS4 291 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 SFRP5Q5T4F7 317 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 AADACL4Q5VUY2 407 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 MEDAGQ5VYS4 303 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 STAC2Q6ZMT1 411 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 BCDIN3DQ7Z5W3 292 aaKnown RBP13.34□□□□□ -0.27
ATG4D-211ENST00000589753 GID4Q8IVV7 300 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 GLB1L2Q8IW92 636 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 PIAS4Q8N2W9 510 aaPredicted RBP13.34□□□□□ -0.27
ATG4D-211ENST00000589753 OR51L1Q8NGJ5 315 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 OR1K1Q8NGR3 316 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 RHOXF1Q8NHV9 184 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 ZNRF4Q8WWF5 429 aa13.34□□□□□ -0.27
ATG4D-211ENST00000589753 KISS1RQ969F8 398 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms