RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	NOSIP	Q9Y314	301 aa	Known RBP	13.89	□□□□□ -0.19
DDX39A-209	ENST00000589318	TMED7	Q9Y3B3	224 aa		13.89	□□□□□ -0.19
DDX39A-209	ENST00000589318	ADAM18	Q9Y3Q7	739 aa		13.89	□□□□□ -0.19
DDX39A-209	ENST00000589318	PTPRB	P23467	1997 aa		13.89	□□□□□ -0.19
DDX39A-209	ENST00000589318	ABCD4	O14678	606 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	RAD1	O60671	282 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	NOS3	P29474	1203 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	HOXA1	P49639	335 aa	Predicted RBP	13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	CRMP1	Q14194	572 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	LIPK	Q5VXJ0	399 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	C22orf42	Q6IC83	251 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	ARHGAP11A	Q6P4F7	1023 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	PAQR6	Q6TCH4	344 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	OPN5	Q6U736	354 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	IL20RB	Q6UXL0	311 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	DPY19L2P2	Q6ZN68	376 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	FGD2	Q7Z6J4	655 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	KISS1R	Q969F8	398 aa	Predicted RBP	13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	RFK	Q969G6	155 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	OTULIN	Q96BN8	352 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	SDHAF2	Q9NX18	166 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	P4HTM	Q9NXG6	502 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	PPP4R1L	Q9P1A2	415 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	MRPS18B	Q9Y676	258 aa	Known RBP	13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	TRAV36DV7	A0A075B6V5	113 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	MEIKIN	A0A087WXM9	373 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	RAB36	O95755	333 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	MSX1	P28360	303 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	GABRA5	P31644	462 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	AQP2	P41181	271 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	ZNF81	P51508	661 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	SSR4	P51571	173 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	PRPS1	P60891	318 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	TSC22D1	Q15714	1073 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	H3F3C	Q6NXT2	135 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	GLCCI1	Q86VQ1	547 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	OR6M1	Q8NGM8	313 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	TMEM234	Q8WY98	164 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	OR51J1	Q9H342	316 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	DPAGT1	Q9H3H5	408 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	FKRP	Q9H9S5	495 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	B3GAT2	Q9NPZ5	323 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	IER3IP1	Q9Y5U9	82 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	KCNMB2	Q9Y691	235 aa		13.88	□□□□□ -0.19
DDX39A-209	ENST00000589318	RIF1	Q5UIP0	2472 aa	Known RBP	13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	TRDV1	A0A1B0GX56	115 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318		M0R233	179 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	ARPC3	O15145	178 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	HIST1H1C	P16403	213 aa	Known RBP	13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	SLC2A5	P22732	501 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	DNASE1	P24855	282 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	TGM4	P49221	684 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	ZNF169	Q14929	603 aa	Predicted RBP	13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	ZNF468	Q5VIY5	522 aa	Predicted RBP	13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	CD200R1L	Q6Q8B3	271 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	CFAP77	Q6ZQR2	320 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	SHF	Q7M4L6	423 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	GID4	Q8IVV7	300 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	C10orf53	Q8N6V4	93 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	FADS6	Q8N9I5	356 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	WDSUB1	Q8N9V3	476 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	CYB561A3	Q8NBI2	242 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	OR2M3	Q8NG83	312 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	OR2T4	Q8NH00	348 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	ADAMTS17	Q8TE56	1095 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	OR11A1	Q9GZK7	315 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	PROK2	Q9HC23	129 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	COMMD3	Q9UBI1	195 aa		13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	EXOG	Q9Y2C4	368 aa	Known RBP	13.87	□□□□□ -0.19
DDX39A-209	ENST00000589318	TMEM129	A0AVI4	362 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	PCP4L1	A6NKN8	68 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	RIIAD1	A6NNX1	92 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318		A8MVM7	634 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	BLOC1S5-TXNDC5	H3BN57	136 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	STMND1	H3BQB6	276 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	TP53I11	O14683	189 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	PAH	P00439	452 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	CLEC2L	P0C7M8	214 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	CCL3	P10147	92 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	GAL	P22466	123 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	WNT4	P56705	351 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	FOXF1	Q12946	379 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	CAMK2D	Q13557	499 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	GPR176	Q14439	515 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	PLPPR5	Q32ZL2	321 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	SLC25A53	Q5H9E4	307 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	PRAMEF20	Q5VT98	475 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	B3GLCT	Q6Y288	498 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	MEPCE	Q7L2J0	689 aa	Known RBP	13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	FAM122B	Q7Z309	247 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	MS4A15	Q8N5U1	240 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	OR4F15	Q8NGB8	312 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	OR11H7	Q8NGC8	314 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	STK35	Q8TDR2	534 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	PAQR8	Q8TEZ7	354 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	DNAJA3	Q96EY1	480 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	WBP1	Q96G27	269 aa		13.86	□□□□□ -0.19
DDX39A-209	ENST00000589318	SECISBP2	Q96T21	854 aa	Known RBP	13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms