RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 FAM205BPQ63HN1 556 aa21.97■■□□□ 1.11
RFX1-205ENST00000589239 NIPAL3Q6P499 406 aa21.97■■□□□ 1.11
RFX1-205ENST00000589239 TUSC5Q8IXB3 177 aa21.97■■□□□ 1.11
RFX1-205ENST00000589239 OR51L1Q8NGJ5 315 aa21.97■■□□□ 1.11
RFX1-205ENST00000589239 ASB6Q9NWX5 421 aa21.97■■□□□ 1.11
RFX1-205ENST00000589239 RBMX2Q9Y388 322 aaKnown RBP21.97■■□□□ 1.11
RFX1-205ENST00000589239 IGKV3D-15A0A087WSY6 115 aa21.96■■□□□ 1.11
RFX1-205ENST00000589239 SLC22A23A1A5C7 686 aa21.96■■□□□ 1.11
RFX1-205ENST00000589239 PRODHO43272 600 aa21.96■■□□□ 1.11
RFX1-205ENST00000589239 RENP00797 406 aa21.96■■□□□ 1.11
RFX1-205ENST00000589239 SELENOPP49908 381 aa21.96■■□□□ 1.11
RFX1-205ENST00000589239 CDH11P55287 796 aa21.96■■□□□ 1.11
RFX1-205ENST00000589239 RNPS1Q15287 305 aaKnown RBP21.96■■□□□ 1.11
RFX1-205ENST00000589239 B3GLCTQ6Y288 498 aa21.96■■□□□ 1.11
RFX1-205ENST00000589239 P4HA3Q7Z4N8 544 aa21.96■■□□□ 1.11
RFX1-205ENST00000589239 FAM57AQ8TBR7 257 aa21.96■■□□□ 1.11
RFX1-205ENST00000589239 ZNRF4Q8WWF5 429 aa21.96■■□□□ 1.11
RFX1-205ENST00000589239 ZNF566Q969W8 418 aa21.96■■□□□ 1.11
RFX1-205ENST00000589239 ADAD1Q96M93 576 aaKnown RBP21.96■■□□□ 1.11
RFX1-205ENST00000589239 MRPL13Q9BYD1 178 aaKnown RBP21.96■■□□□ 1.11
RFX1-205ENST00000589239 NMNAT2Q9BZQ4 307 aa21.96■■□□□ 1.11
RFX1-205ENST00000589239 NUAK2Q9H093 628 aa21.96■■□□□ 1.11
RFX1-205ENST00000589239 RNF122Q9H9V4 155 aa21.96■■□□□ 1.11
RFX1-205ENST00000589239 VSX1Q9NZR4 365 aaPredicted RBP21.96■■□□□ 1.11
RFX1-205ENST00000589239 H2AFY2Q9P0M6 372 aaPredicted RBP21.96■■□□□ 1.11
RFX1-205ENST00000589239 SH3D21A4FU49 640 aa21.95■■□□□ 1.11
RFX1-205ENST00000589239 SLC22A1O15245 554 aa21.95■■□□□ 1.11
RFX1-205ENST00000589239 IGHG1P01857 330 aa21.95■■□□□ 1.11
RFX1-205ENST00000589239 PGA4P0DJD7 388 aa21.95■■□□□ 1.11
RFX1-205ENST00000589239 PGA3P0DJD8 388 aa21.95■■□□□ 1.11
RFX1-205ENST00000589239 CXCR4P61073 352 aa21.95■■□□□ 1.11
RFX1-205ENST00000589239 RPTNQ6XPR3 784 aa21.95■■□□□ 1.11
RFX1-205ENST00000589239 MCEMP1Q8IX19 187 aa21.95■■□□□ 1.11
RFX1-205ENST00000589239 SGCDQ92629 289 aa21.95■■□□□ 1.11
RFX1-205ENST00000589239 RERGLQ9H628 205 aa21.95■■□□□ 1.11
RFX1-205ENST00000589239 BCO1Q9HAY6 547 aa21.95■■□□□ 1.11
RFX1-205ENST00000589239 SRA1Q9HD15 236 aaKnown RBP21.95■■□□□ 1.11
RFX1-205ENST00000589239 SNX5Q9Y5X3 404 aa21.95■■□□□ 1.11
RFX1-205ENST00000589239 RP1L1Q8IWN7 2480 aaPredicted RBP21.95■■□□□ 1.1
RFX1-205ENST00000589239 FAM20BO75063 409 aa21.95■■□□□ 1.1
RFX1-205ENST00000589239 ZNF432O94892 652 aa21.95■■□□□ 1.1
RFX1-205ENST00000589239 GABARAPO95166 117 aa21.95■■□□□ 1.1
RFX1-205ENST00000589239 FCGR2AP12318 317 aa21.95■■□□□ 1.1
RFX1-205ENST00000589239 SERPINB10P48595 397 aa21.95■■□□□ 1.1
RFX1-205ENST00000589239 TPTEP56180 551 aa21.95■■□□□ 1.1
RFX1-205ENST00000589239 FMODQ06828 376 aa21.95■■□□□ 1.1
RFX1-205ENST00000589239 OR6V1Q8N148 313 aa21.95■■□□□ 1.1
RFX1-205ENST00000589239 OR2M2Q96R28 347 aa21.95■■□□□ 1.1
RFX1-205ENST00000589239 CALHM2Q9HA72 323 aa21.95■■□□□ 1.1
RFX1-205ENST00000589239 IGSF10Q6WRI0 2623 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 FAM171A2A8MVW0 826 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 CCDC159P0C7I6 412 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 SPI1P17947 270 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 SLC2A5P22732 501 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 RPS7P62081 194 aaKnown RBP21.94■■□□□ 1.1
RFX1-205ENST00000589239 DGUOKQ16854 277 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 HDDC2Q7Z4H3 204 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 GID4Q8IVV7 300 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 CPT1CQ8TCG5 803 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 SNX18Q96RF0 628 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 POU2F3Q9UKI9 436 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 PTGES3LE9PB15 166 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 GPR171O14626 319 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 CLRN1P58418 232 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 ZNF91Q05481 1191 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.94■■□□□ 1.1
RFX1-205ENST00000589239 NOXO1Q8NFA2 376 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 RFKQ969G6 155 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 PAK1IP1Q9NWT1 392 aaPredicted RBP21.94■■□□□ 1.1
RFX1-205ENST00000589239 EMC3Q9P0I2 261 aa21.94■■□□□ 1.1
RFX1-205ENST00000589239 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.94■■□□□ 1.1
RFX1-205ENST00000589239 NOSIPQ9Y314 301 aaKnown RBP21.94■■□□□ 1.1
RFX1-205ENST00000589239 FIGNL2A6NMB9 653 aa21.93■■□□□ 1.1
RFX1-205ENST00000589239 DBTP11182 482 aaKnown RBP21.93■■□□□ 1.1
RFX1-205ENST00000589239 BMP4P12644 408 aa21.93■■□□□ 1.1
RFX1-205ENST00000589239 CTLA4P16410 223 aa21.93■■□□□ 1.1
RFX1-205ENST00000589239 PCMT1P22061 227 aa21.93■■□□□ 1.1
RFX1-205ENST00000589239 NR4A1P22736 598 aa21.93■■□□□ 1.1
RFX1-205ENST00000589239 SLC25A1P53007 311 aa21.93■■□□□ 1.1
RFX1-205ENST00000589239 GP2P55259 537 aaKnown RBP21.93■■□□□ 1.1
RFX1-205ENST00000589239 C6orf183Q5T699 404 aa21.93■■□□□ 1.1
RFX1-205ENST00000589239 C3P1Q6ZMU1 363 aa21.93■■□□□ 1.1
RFX1-205ENST00000589239 MEPCEQ7L2J0 689 aaKnown RBP21.93■■□□□ 1.1
RFX1-205ENST00000589239 AAED1Q7RTV5 226 aa21.93■■□□□ 1.1
RFX1-205ENST00000589239 TMEM123Q8N131 208 aa21.93■■□□□ 1.1
RFX1-205ENST00000589239 ZNF540Q8NDQ6 660 aa21.93■■□□□ 1.1
RFX1-205ENST00000589239 PLCXD1Q9NUJ7 323 aa21.93■■□□□ 1.1
RFX1-205ENST00000589239 SLC16A7O60669 478 aa21.92■■□□□ 1.1
RFX1-205ENST00000589239 WDR1O75083 606 aa21.92■■□□□ 1.1
RFX1-205ENST00000589239 YES1P07947 543 aa21.92■■□□□ 1.1
RFX1-205ENST00000589239 EDN3P14138 238 aa21.92■■□□□ 1.1
RFX1-205ENST00000589239 GABRA1P14867 456 aa21.92■■□□□ 1.1
RFX1-205ENST00000589239 HTR1FP30939 366 aa21.92■■□□□ 1.1
RFX1-205ENST00000589239 PYCR1P32322 319 aa21.92■■□□□ 1.1
RFX1-205ENST00000589239 SF3B4Q15427 424 aaKnown RBP eCLIP21.92■■□□□ 1.11e-7■■■■□ 22.6
RFX1-205ENST00000589239 ETFDHQ16134 617 aa21.92■■□□□ 1.1
RFX1-205ENST00000589239 RTL6Q6ICC9 239 aa21.92■■□□□ 1.1
RFX1-205ENST00000589239 SNX29P2Q8IUI4 249 aa21.92■■□□□ 1.1
RFX1-205ENST00000589239 C9orf106Q8NAJ2 232 aa21.92■■□□□ 1.1
RFX1-205ENST00000589239 OR6Q1Q8NGQ2 317 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms