RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 TNFRSF13CQ96RJ3 184 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 DOK1Q99704 481 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 SH3GL3Q99963 347 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 ALG12Q9BV10 488 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 SLC7A8Q9UHI5 535 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 SAMD4AQ9UPU9 718 aaKnown RBP12.47□□□□□ -0.41
DDX39A-208ENST00000588692 ENPP4Q9Y6X5 453 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 ABCA2Q9BZC7 2435 aa12.47□□□□□ -0.41
DDX39A-208ENST00000588692 A0A087WUU8 490 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 LOC390937A0A1W2PQ73 354 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 EFCAB9A8MZ26 197 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 LY6HO94772 140 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 PTHP01270 115 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 NCK1P16333 377 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 MAKP20794 623 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 RPL27P61353 136 aaKnown RBP12.46□□□□□ -0.41
DDX39A-208ENST00000588692 LSM11P83369 360 aaKnown RBP eCLIP12.46□□□□□ -0.41
DDX39A-208ENST00000588692 MYBPC1Q00872 1141 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 FXNQ16595 210 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 GKAP1Q5VSY0 366 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-208ENST00000588692 GLYATQ6IB77 296 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 OAFQ86UD1 273 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 ZNF584Q8IVC4 421 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 FAM156AQ8NDB6 213 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 FGFBP3Q8TAT2 258 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 NEU4Q8WWR8 484 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-208ENST00000588692 MRPL24Q96A35 216 aaKnown RBP12.46□□□□□ -0.41
DDX39A-208ENST00000588692 NMD3Q96D46 503 aaKnown RBP12.46□□□□□ -0.41
DDX39A-208ENST00000588692 KCNK17Q96T54 332 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 PIMREGQ9BSJ6 248 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 NDEL1Q9GZM8 345 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 RNF121Q9H920 327 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 NMNAT1Q9HAN9 279 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-208ENST00000588692 DYNLRB1Q9NP97 96 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 ADA2Q9NZK5 511 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 TMEM5Q9Y2B1 443 aa12.46□□□□□ -0.41
DDX39A-208ENST00000588692 CHD3Q12873 2000 aaKnown RBP12.46□□□□□ -0.42
DDX39A-208ENST00000588692 SLC22A23A1A5C7 686 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 A6NIZ1 184 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 VWC2LB2RUY7 222 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 PATE4P0C8F1 98 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 RAP1BP61224 184 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 RAP1AP62834 184 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 GNGT1P63211 74 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 VLDLRP98155 873 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 PLP2Q04941 152 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 CD47Q08722 323 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 TOP3AQ13472 1001 aaPredicted RBP12.46□□□□□ -0.42
DDX39A-208ENST00000588692 TMEM249Q2WGJ8 235 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 THEM4Q5T1C6 240 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 TMPRSS11FQ6ZWK6 438 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 RRM2BQ7LG56 351 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 RBM15BQ8NDT2 890 aaKnown RBP12.46□□□□□ -0.42
DDX39A-208ENST00000588692 SLC30A7Q8NEW0 376 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 OR1J2Q8NGS2 313 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 HDAC2Q92769 488 aaKnown RBP12.46□□□□□ -0.42
DDX39A-208ENST00000588692 RBP7Q96R05 134 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 KCNN2Q9H2S1 579 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 SIAEQ9HAT2 523 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 DCAF13Q9NV06 445 aaKnown RBP12.46□□□□□ -0.42
DDX39A-208ENST00000588692 EGFL7Q9UHF1 273 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 ARL2BPQ9Y2Y0 163 aa12.46□□□□□ -0.42
DDX39A-208ENST00000588692 FAM32AQ9Y421 112 aaKnown RBP12.46□□□□□ -0.42
DDX39A-208ENST00000588692 YLPM1P49750 1951 aaKnown RBP12.46□□□□□ -0.42
DDX39A-208ENST00000588692 SONP18583 2426 aaKnown RBP12.45□□□□□ -0.42
DDX39A-208ENST00000588692 TRAV27A0A087WT01 109 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 IQCMA0A1B0GVH7 501 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 A0A1W2PRQ8 180 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 TMEM129A0AVI4 362 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 SYNGR3O43761 229 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 GPRIN2O60269 458 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 CRLF1O75462 422 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 DCTN3O75935 186 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 SLC2A10O95528 541 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 SNAP29O95721 258 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 H1F0P07305 194 aaKnown RBP12.45□□□□□ -0.42
DDX39A-208ENST00000588692 HSD17B1P14061 328 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 FUT4P22083 530 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 USF1P22415 310 aaPredicted RBP12.45□□□□□ -0.42
DDX39A-208ENST00000588692 CTXN1P60606 82 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 FHL1Q13642 323 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 DGCR6Q14129 220 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 TBC1D28Q2M2D7 210 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 LRRC75AQ8NAA5 344 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 ZNF540Q8NDQ6 660 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 OR51A7Q8NH64 312 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 LRRC37BQ96QE4 947 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 MRPL37Q9BZE1 423 aaKnown RBP12.45□□□□□ -0.42
DDX39A-208ENST00000588692 LRMDAQ9H2I8 198 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 GORASP2Q9H8Y8 452 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 CDH20Q9HBT6 801 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 MAGEL2Q9UJ55 1249 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 ZNF346Q9UL40 294 aaKnown RBP12.45□□□□□ -0.42
DDX39A-208ENST00000588692 UGT2A1Q9Y4X1 527 aa12.45□□□□□ -0.42
DDX39A-208ENST00000588692 JMJD1CQ15652 2540 aa12.44□□□□□ -0.42
DDX39A-208ENST00000588692 M0R233 179 aa12.44□□□□□ -0.42
DDX39A-208ENST00000588692 MMP7P09237 267 aaPredicted RBP12.44□□□□□ -0.42
DDX39A-208ENST00000588692 ITGA2P17301 1181 aa12.44□□□□□ -0.42
DDX39A-208ENST00000588692 RHCEP18577 417 aa12.44□□□□□ -0.42
DDX39A-208ENST00000588692 NR4A2P43354 598 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms