RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 MMACHCQ9Y4U1 282 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 KCNMB2Q9Y691 235 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.82■□□□□ 0.28
DDX39A-206ENST00000587730 SEMA4FO95754 770 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 F13BP05160 661 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 HOXD4P09016 255 aaPredicted RBP16.82■□□□□ 0.28
DDX39A-206ENST00000587730 EGR4Q05215 589 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 MAMSTRQ6ZN01 415 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 MAMDC2Q7Z304 686 aaPredicted RBP16.82■□□□□ 0.28
DDX39A-206ENST00000587730 BPHLQ86WA6 291 aaPredicted RBP16.82■□□□□ 0.28
DDX39A-206ENST00000587730 PRSS35Q8N3Z0 413 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 CLEC1AQ8NC01 280 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 FAM174AQ8TBP5 190 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 RNF128Q8TEB7 428 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 GPR174Q9BXC1 333 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 IGFLR1Q9H665 355 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 EXO5Q9H790 373 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 UCK1Q9HA47 277 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 TMEM138Q9NPI0 162 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 EPHA6Q9UF33 1036 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 GMEB2Q9UKD1 530 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 PLCL2Q9UPR0 1127 aa16.82■□□□□ 0.28
DDX39A-206ENST00000587730 TRAV18A0A075B6X5 111 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 A0A0D9SG52 128 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 TVP23AA6NH52 213 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 RFPL4AA6NLU0 287 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 C10orf142B7Z368 130 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 RFPL4AL1F8VTS6 287 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 EIF4E2O60573 245 aaKnown RBP16.81■□□□□ 0.28
DDX39A-206ENST00000587730 CLPSP04118 112 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 ITGB2P05107 769 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 ZNF35P13682 527 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 CXCR1P25024 350 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 TACR3P29371 465 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 PPP1CAP62136 330 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 BTG2P78543 158 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 DMWDQ09019 674 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 CD226Q15762 336 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 WDR38Q5JTN6 314 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 STPG1Q5TH74 334 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 FAM166AQ6J272 317 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 C11orf88Q6PI97 169 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 TMEM205Q6UW68 189 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 OR51D1Q8NGF3 324 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 PTX4Q96A99 478 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 RPP25Q9BUL9 199 aaKnown RBP16.81■□□□□ 0.28
DDX39A-206ENST00000587730 CHRNA10Q9GZZ6 450 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 SLC25A32Q9H2D1 315 aa16.81■□□□□ 0.28
DDX39A-206ENST00000587730 ZNF346Q9UL40 294 aaKnown RBP16.81■□□□□ 0.28
DDX39A-206ENST00000587730 FXYD6-FXYD2A0A087WZ82 144 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 SPTY2D1-AS1A0A0U1RR47 76 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 C17orf105B2RV13 164 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 GOSR2O14653 212 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 HCRTR1O43613 425 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 NUDT21O43809 227 aaKnown RBP16.8■□□□□ 0.28
DDX39A-206ENST00000587730 CDC123O75794 336 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-206ENST00000587730 SCO1O75880 301 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 WNT11O96014 354 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 UBBP0CG47 229 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 UBCP0CG48 685 aaKnown RBP16.8■□□□□ 0.28
DDX39A-206ENST00000587730 TMIGD3P0DMS9 266 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-206ENST00000587730 CD37P11049 281 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 MAOAP21397 527 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 KIR3DL2P43630 455 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 H2BFSP57053 126 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 RPS27AP62979 156 aaKnown RBP16.8■□□□□ 0.28
DDX39A-206ENST00000587730 UBA52P62987 128 aaKnown RBP16.8■□□□□ 0.28
DDX39A-206ENST00000587730 MAT1AQ00266 395 aaKnown RBP16.8■□□□□ 0.28
DDX39A-206ENST00000587730 C2orf76Q3KRA6 126 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 C4orf46Q504U0 113 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 C5orf46Q6UWT4 87 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 NHLRC1Q6VVB1 395 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 MUC20Q8N307 709 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-206ENST00000587730 OR51S1Q8NGJ8 323 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 OR5M1Q8NGP8 315 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 HMGB4Q8WW32 186 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 SHARPINQ9H0F6 387 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 FXYD6Q9H0Q3 95 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 DNTTIP1Q9H147 329 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 SYT4Q9H2B2 425 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 CDCP1Q9H5V8 836 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 ELOVL3Q9HB03 270 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 MSRAQ9UJ68 235 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 DHDHQ9UQ10 334 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 SPTBN5Q9NRC6 3674 aaKnown RBP16.8■□□□□ 0.28
DDX39A-206ENST00000587730 REV3LO60673 3130 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 A0A1W2PQD3 144 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 DCTN6O00399 190 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 WDPCPO95876 746 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 FGF2P09038 288 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 PTHLHP12272 177 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 ZMYND11Q15326 602 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 CSRP2Q16527 193 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 SGCBQ16585 318 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 NKAIN2Q5VXU1 208 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 GABRG1Q8N1C3 465 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 SLC22A18ASQ8N1D0 253 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 OR6M1Q8NGM8 313 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 OR5M9Q8NGP3 310 aa16.8■□□□□ 0.28
DDX39A-206ENST00000587730 METTL21AQ8WXB1 218 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms