RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 NSUN5P2Q63ZY6 315 aa16.08■□□□□ 0.16
NDEL1-217ENST00000583683 LYPD4Q6UWN0 246 aa16.08■□□□□ 0.16
NDEL1-217ENST00000583683 MCEMP1Q8IX19 187 aa16.08■□□□□ 0.16
NDEL1-217ENST00000583683 OR51G2Q8NGK0 314 aa16.08■□□□□ 0.16
NDEL1-217ENST00000583683 OR52I1Q8NGK6 324 aa16.08■□□□□ 0.16
NDEL1-217ENST00000583683 FNDC8Q8TC99 324 aa16.08■□□□□ 0.16
NDEL1-217ENST00000583683 WNT2BQ93097 391 aa16.08■□□□□ 0.16
NDEL1-217ENST00000583683 MYDGFQ969H8 173 aa16.08■□□□□ 0.16
NDEL1-217ENST00000583683 TMEM54Q969K7 222 aa16.08■□□□□ 0.16
NDEL1-217ENST00000583683 RBP7Q96R05 134 aa16.08■□□□□ 0.16
NDEL1-217ENST00000583683 RACGAP1Q9H0H5 632 aa16.08■□□□□ 0.16
NDEL1-217ENST00000583683 FREM1Q5H8C1 2179 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 PHF3Q92576 2039 aaKnown RBP16.07■□□□□ 0.16
NDEL1-217ENST00000583683 CD8B2A6NJW9 211 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 FIGNL2A6NMB9 653 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 RGS10O43665 173 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 CDK1P06493 297 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 CSNK1A1P48729 337 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 GGTLC2Q14390 218 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 SF3B4Q15427 424 aaKnown RBP eCLIP16.07■□□□□ 0.16
NDEL1-217ENST00000583683 KLHL22Q53GT1 634 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 PHYHD1Q5SRE7 291 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 RTL6Q6ICC9 239 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 LRFN4Q6PJG9 635 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 SHFQ7M4L6 423 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 OR4F15Q8NGB8 312 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 MCHR2Q969V1 340 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 ADGRL4Q9HBW9 690 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 GLTPQ9NZD2 209 aa16.07■□□□□ 0.16
NDEL1-217ENST00000583683 EXOGQ9Y2C4 368 aaKnown RBP16.07■□□□□ 0.16
NDEL1-217ENST00000583683 SHANK1Q9Y566 2161 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 MRPL33O75394 65 aaKnown RBP16.06■□□□□ 0.16
NDEL1-217ENST00000583683 QDPRP09417 244 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 EDN3P14138 238 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 EDNRAP25101 427 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 AGTR1P30556 359 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 PTGER4P35408 488 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 LCN1P1Q5VSP4 162 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 DNM1P34Q6PK57 102 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 ZNF773Q6PK81 442 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 PRSS48Q7RTY5 328 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 C20orf196Q8IYI0 205 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 STX19Q8N4C7 294 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 C9orf106Q8NAJ2 232 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 OR6N1Q8NGY5 312 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 INTS12Q96CB8 462 aaKnown RBP16.06■□□□□ 0.16
NDEL1-217ENST00000583683 GMPPAQ96IJ6 420 aaPredicted RBP16.06■□□□□ 0.16
NDEL1-217ENST00000583683 FGF20Q9NP95 211 aaPredicted RBP16.06■□□□□ 0.16
NDEL1-217ENST00000583683 PARPBPQ9NWS1 579 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 ZNF835Q9Y2P0 537 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 COA3Q9Y2R0 106 aaPredicted RBP16.06■□□□□ 0.16
NDEL1-217ENST00000583683 FAM215AQ9Y5M1 114 aa16.06■□□□□ 0.16
NDEL1-217ENST00000583683 J3QRE1 110 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 SS18L1O75177 396 aaPredicted RBP16.05■□□□□ 0.16
NDEL1-217ENST00000583683 SLC43A1O75387 559 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 GPANK1O95872 356 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 MRPL3P09001 348 aaKnown RBP16.05■□□□□ 0.16
NDEL1-217ENST00000583683 SBK2P0C263 348 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 ATP6V1B1P15313 513 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 ATP6V1E1P36543 226 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 ZNF133P52736 654 aaPredicted RBP16.05■□□□□ 0.16
NDEL1-217ENST00000583683 NR1H2P55055 460 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 GUSBP1Q15486 140 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 SLC25A47Q6Q0C1 308 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 SEM1Q6ZVN7 128 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.05■□□□□ 0.16
NDEL1-217ENST00000583683 ZNF511Q8NB15 262 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 NSMAFQ92636 917 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 TMEM80Q96HE8 168 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 FOXN4Q96NZ1 517 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 CCDC90BQ9GZT6 254 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 GLRX2Q9NS18 164 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 CACNA1BQ00975 2339 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 KALRNO60229 2985 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 A0A087WXM4 84 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 IRGMA1A4Y4 181 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 MBD3L4A6NDZ8 208 aaPredicted RBP16.05■□□□□ 0.16
NDEL1-217ENST00000583683 MBD3L3A6NE82 208 aaPredicted RBP16.05■□□□□ 0.16
NDEL1-217ENST00000583683 MBD3L5A6NJ08 208 aaPredicted RBP16.05■□□□□ 0.16
NDEL1-217ENST00000583683 TRIM64CA6NLI5 447 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 SLC19A2O60779 497 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 KHDRBS3O75525 346 aaKnown RBP16.05■□□□□ 0.16
NDEL1-217ENST00000583683 FADS2O95864 444 aaKnown RBP16.05■□□□□ 0.16
NDEL1-217ENST00000583683 MT-ND2P03891 347 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 NR2C1P13056 603 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 GLO1Q04760 184 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 POU4F2Q12837 409 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 NUFIP2Q7Z417 695 aaKnown RBP16.05■□□□□ 0.16
NDEL1-217ENST00000583683 GCNT2Q8N0V5 402 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 SPARTQ8N0X7 666 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 MBD3L2Q8NHZ7 208 aaPredicted RBP16.05■□□□□ 0.16
NDEL1-217ENST00000583683 TM9SF2Q99805 663 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 GALNT8Q9NY28 637 aa16.05■□□□□ 0.16
NDEL1-217ENST00000583683 DIMT1Q9UNQ2 313 aaKnown RBP16.05■□□□□ 0.16
NDEL1-217ENST00000583683 PRRG2O14669 202 aa16.04■□□□□ 0.16
NDEL1-217ENST00000583683 SELENOFO60613 162 aa16.04■□□□□ 0.16
NDEL1-217ENST00000583683 MRPS14O60783 128 aaKnown RBP16.04■□□□□ 0.16
NDEL1-217ENST00000583683 UPK3AO75631 287 aa16.04■□□□□ 0.16
NDEL1-217ENST00000583683 DCKP27707 260 aa16.04■□□□□ 0.16
NDEL1-217ENST00000583683 NFATC3Q12968 1075 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms