RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 VRK1Q99986 396 aaPredicted RBP16.86■□□□□ 0.29
SREBF1-220ENST00000581707 NDUFAF4Q9P032 175 aa16.86■□□□□ 0.29
SREBF1-220ENST00000581707 ZNF346Q9UL40 294 aaKnown RBP16.86■□□□□ 0.29
SREBF1-220ENST00000581707 SPEF1Q9Y4P9 236 aa16.86■□□□□ 0.29
SREBF1-220ENST00000581707 ABCA1O95477 2261 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 hCG_2039718K7EN88 272 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 DYNC1I1O14576 645 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 LY6HO94772 140 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 SERPINA5P05154 406 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 H1F0P07305 194 aaKnown RBP16.85■□□□□ 0.29
SREBF1-220ENST00000581707 RHCEP18577 417 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 GPR4P46093 362 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 SLC9A3P48764 834 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 CD47Q08722 323 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 FHL1Q13642 323 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 SAMD4BQ5PRF9 694 aaKnown RBP16.85■□□□□ 0.29
SREBF1-220ENST00000581707 C10orf128Q5T292 105 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 TMEM53Q6P2H8 277 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 PODNL1Q6PEZ8 512 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 TMPRSS11FQ6ZWK6 438 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 SLC16A14Q7RTX9 510 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 IGFN1Q86VF2 1251 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 FAM86B1Q8N7N1 296 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 ANKS4BQ8N8V4 417 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 LRRC75AQ8NAA5 344 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 SLC7A13Q8TCU3 470 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 SORCS2Q96PQ0 1159 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 CCT8L2Q96SF2 557 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 KCNK17Q96T54 332 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 RNF121Q9H920 327 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 SMURF2Q9HAU4 748 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 CD300AQ9UGN4 299 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 FBXO9Q9UK97 447 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-220ENST00000581707 CMAHPQ9Y471 501 aa16.85■□□□□ 0.29
SREBF1-220ENST00000581707 A0A1W2PRQ8 180 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 SLC2A10O95528 541 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 IGHMP01871 453 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 NR2C1P13056 603 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 MSX2P35548 267 aaPredicted RBP16.84■□□□□ 0.29
SREBF1-220ENST00000581707 DGCR6Q14129 220 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 FXNQ16595 210 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 SLC36A2Q495M3 483 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 FAM205BPQ63HN1 556 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 ZNF584Q8IVC4 421 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 SVOPLQ8N434 492 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 LRRC18Q8N456 261 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 FAM168AQ92567 244 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 NMD3Q96D46 503 aaKnown RBP16.84■□□□□ 0.29
SREBF1-220ENST00000581707 DOK1Q99704 481 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 ALG12Q9BV10 488 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 NDE1Q9NXR1 346 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 MAGEL2Q9UJ55 1249 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 TMEM5Q9Y2B1 443 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 FKBP7Q9Y680 259 aa16.84■□□□□ 0.29
SREBF1-220ENST00000581707 TMEM129A0AVI4 362 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 A6NIZ1 184 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 CDC42EP2O14613 210 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 MGRN1O60291 552 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 CSF3P09919 207 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 PPOXP50336 477 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 RAP1BP61224 184 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 RAP1AP62834 184 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 MRPS34P82930 218 aaKnown RBP16.83■□□□□ 0.28
SREBF1-220ENST00000581707 MXRA7P84157 204 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 VLDLRP98155 873 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 GALK2Q01415 458 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 FMODQ06828 376 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 KRT72Q14CN4 511 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 ZBED5Q49AG3 693 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 FGD3Q5JSP0 725 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 THEM4Q5T1C6 240 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 GKAP1Q5VSY0 366 aaPredicted RBP16.83■□□□□ 0.28
SREBF1-220ENST00000581707 SLC25A47Q6Q0C1 308 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 C16orf89Q6UX73 402 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 RTTNQ86VV8 2226 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 NSMAFQ92636 917 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 PYURFQ96I23 114 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 RBP7Q96R05 134 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 SIAEQ9HAT2 523 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 UGT2A1Q9Y4X1 527 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 V9GYQ6 96 aa16.83■□□□□ 0.28
SREBF1-220ENST00000581707 IGKV1D-43A0A0B4J1Z2 117 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 SH3PXD2BA1X283 911 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 GPRIN2O60269 458 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 DIRAS1O95057 198 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 SLC25A16P16260 332 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 ITGA2P17301 1181 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 PCSK6P29122 969 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 CDAP32320 146 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 GLRXP35754 106 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 RPL4P36578 427 aaKnown RBP16.82■□□□□ 0.28
SREBF1-220ENST00000581707 MNAT1P51948 309 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 KRTAP1-1Q07627 177 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 SGCAQ16586 387 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 DEFB107AQ8IZN7 70 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 ARIH2OSQ8N7S6 290 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 SLC30A7Q8NEW0 376 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 ZNF519Q8TB69 540 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 FNDC8Q8TC99 324 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 C10orf105Q8TEF2 133 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms