RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 ZAR1LA6NP61 321 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 E9PQ18 207 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 PPP3CBP16298 524 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 CTLA4P16410 223 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 PEX2P28328 305 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 POLR2IP36954 125 aaKnown RBP13.24□□□□□ -0.29
MKS1-210ENST00000581180 NPRL3Q12980 569 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 PTGES3Q15185 160 aaKnown RBP13.24□□□□□ -0.29
MKS1-210ENST00000581180 TRIP10Q15642 601 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 TMEM236Q5W0B7 351 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 LPCAT4Q643R3 524 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 SP5Q6BEB4 398 aaPredicted RBP13.24□□□□□ -0.29
MKS1-210ENST00000581180 LEG1Q6P5S2 330 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 FOXL2NBQ6ZUU3 175 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 JAZF1Q86VZ6 243 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 WDR31Q8NA23 367 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 SLC37A3Q8NCC5 494 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 SDR9C7Q8NEX9 313 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 LINC01560Q8TB33 94 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 WFIKKN1Q96NZ8 548 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 FOXB1Q99853 325 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 USB1Q9BQ65 265 aaKnown RBP13.24□□□□□ -0.29
MKS1-210ENST00000581180 CMC2Q9NRP2 79 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 PLEKHB1Q9UF11 243 aaPredicted RBP13.24□□□□□ -0.29
MKS1-210ENST00000581180 KLHL21Q9UJP4 597 aa13.24□□□□□ -0.29
MKS1-210ENST00000581180 ROS1P08922 2347 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 TUBAL3A6NHL2 446 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 OR5H1A6NKK0 313 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 DCTN6O00399 190 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 THBDP07204 575 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 CDH2P19022 906 aaPredicted RBP13.23□□□□□ -0.29
MKS1-210ENST00000581180 SLC34A1Q06495 639 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 RIPK1Q13546 671 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 ETFDHQ16134 617 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 TBRG1Q3YBR2 411 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 TIMM23BQ5SRD1 257 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 OGFRL1Q5TC84 451 aaPredicted RBP13.23□□□□□ -0.29
MKS1-210ENST00000581180 SLX4IPQ5VYV7 408 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 ANKRD16Q6P6B7 361 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 MEX3BQ6ZN04 569 aaKnown RBP13.23□□□□□ -0.29
MKS1-210ENST00000581180 P2RY8Q86VZ1 359 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 C17orf78Q8N4C9 275 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 NUAK2Q9H093 628 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 SLC17A5Q9NRA2 495 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 TMEM38BQ9NVV0 291 aa13.23□□□□□ -0.29
MKS1-210ENST00000581180 RRP15Q9Y3B9 282 aaKnown RBP13.23□□□□□ -0.29
MKS1-210ENST00000581180 PLCE1Q9P212 2302 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 SH3D21A4FU49 640 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 DLGAP1O14490 977 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 SURF4O15260 269 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 SLC16A7O60669 478 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 SEC14L2O76054 403 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 RENP00797 406 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 HMGN1P05114 100 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 HOXB1P14653 301 aaPredicted RBP13.22□□□□□ -0.29
MKS1-210ENST00000581180 B4GALT1P15291 398 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 COL8A1P27658 744 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 KIR2DL3P43628 341 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 ZNF84P51523 738 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 RAD23AP54725 363 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 MRPS34P82930 218 aaKnown RBP13.22□□□□□ -0.29
MKS1-210ENST00000581180 CRMP1Q14194 572 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 TAB1Q15750 504 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 NRN1LQ496H8 165 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 HIKESHIQ53FT3 197 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 C12orf73Q69YU5 71 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 SEZ6L2Q6UXD5 910 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 ZNF813Q6ZN06 617 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 ZBTB46Q86UZ6 589 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 OR6V1Q8N148 313 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 CYB561A3Q8NBI2 242 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 NSMAFQ92636 917 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 NABP1Q96AH0 204 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 DACH2Q96NX9 599 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 TSSK2Q96PF2 358 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 NMNAT2Q9BZQ4 307 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 RIBC2Q9H4K1 309 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 C8orf4Q9NR00 106 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 CRIM1Q9NZV1 1036 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 NDRG3Q9UGV2 375 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 B9D1Q9UPM9 204 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 SLC25A15Q9Y619 301 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 FKBP7Q9Y680 259 aa13.22□□□□□ -0.29
MKS1-210ENST00000581180 NBPF19A0A087WUL8 3843 aa13.21□□□□□ -0.29
MKS1-210ENST00000581180 CACNA1DQ01668 2161 aa13.21□□□□□ -0.29
MKS1-210ENST00000581180 A0A096LPE4 126 aa13.21□□□□□ -0.29
MKS1-210ENST00000581180 ARPC4-TTLL3A0A0A6YYG9 625 aa13.21□□□□□ -0.29
MKS1-210ENST00000581180 IGLV1-36A0A0B4J1U3 117 aa13.21□□□□□ -0.29
MKS1-210ENST00000581180 A0A1W2PPZ6 126 aa13.21□□□□□ -0.29
MKS1-210ENST00000581180 KHDRBS3O75525 346 aaKnown RBP13.21□□□□□ -0.29
MKS1-210ENST00000581180 SNAP29O95721 258 aa13.21□□□□□ -0.29
MKS1-210ENST00000581180 IFNGP01579 166 aa13.21□□□□□ -0.29
MKS1-210ENST00000581180 EPXP11678 715 aa13.21□□□□□ -0.29
MKS1-210ENST00000581180 CRABP1P29762 137 aa13.21□□□□□ -0.29
MKS1-210ENST00000581180 CDAP32320 146 aa13.21□□□□□ -0.29
MKS1-210ENST00000581180 EFNB1P98172 346 aa13.21□□□□□ -0.29
MKS1-210ENST00000581180 DBPQ10586 325 aaPredicted RBP13.21□□□□□ -0.29
MKS1-210ENST00000581180 LRRC36Q1X8D7 754 aa13.21□□□□□ -0.29
MKS1-210ENST00000581180 ZIK1Q3SY52 487 aaPredicted RBP13.21□□□□□ -0.29
MKS1-210ENST00000581180 C1QTNF12Q5T7M4 302 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms