RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 POLR2IP36954 125 aaKnown RBP9.16□□□□□ -0.94
CCDC47-203ENST00000580986 CDKN2AP42771 156 aaKnown RBP9.16□□□□□ -0.94
CCDC47-203ENST00000580986 BLVRAP53004 296 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 ADARB1P78563 741 aaKnown RBP9.16□□□□□ -0.94
CCDC47-203ENST00000580986 ROR2Q01974 943 aaKnown RBP9.16□□□□□ -0.94
CCDC47-203ENST00000580986 TEKQ02763 1124 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 TFF3Q07654 80 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.16□□□□□ -0.94
CCDC47-203ENST00000580986 CD47Q08722 323 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 SNCBQ16143 134 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 FBXW10Q5XX13 1052 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 OR7E24Q6IFN5 339 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 LEG1Q6P5S2 330 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 LRFN4Q6PJG9 635 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 SLC25A47Q6Q0C1 308 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF474Q6S9Z5 364 aaPredicted RBP9.16□□□□□ -0.94
CCDC47-203ENST00000580986 P2RY8Q86VZ1 359 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 WDFY1Q8IWB7 410 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 CCDC36Q8IYA8 594 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 DEPDC4Q8N2C3 294 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 GALNT4Q8N4A0 578 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 DHRSXQ8N5I4 330 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF610Q8N9Z0 462 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 SLC37A3Q8NCC5 494 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF555Q8NEP9 628 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 OR52E2Q8NGJ4 325 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 OR2T4Q8NH00 348 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 MCHR2Q969V1 340 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 ALKBH3Q96Q83 286 aaPredicted RBP9.16□□□□□ -0.94
CCDC47-203ENST00000580986 NMNAT3Q96T66 252 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 WACQ9BTA9 647 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 ADI1Q9BV57 179 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 SYT4Q9H2B2 425 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 GPR35Q9HC97 309 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 MOV10Q9HCE1 1003 aaKnown RBP9.16□□□□□ -0.94
CCDC47-203ENST00000580986 KCNJ16Q9NPI9 418 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 PRSS50Q9UI38 385 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 GPR52Q9Y2T5 361 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 KLF2Q9Y5W3 355 aaPredicted RBP9.16□□□□□ -0.94
CCDC47-203ENST00000580986 HSPE1-MOB4S4R3N1 261 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 DOPEY1Q5JWR5 2465 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 FREM1Q5H8C1 2179 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 OR6C68A6NDL8 312 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 DHHO43323 396 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 KRT33AO76009 404 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 HRGP04196 525 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 ITGA5P08648 1049 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 QDPRP09417 244 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 PPP3CBP16298 524 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 NPR2P20594 1047 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 IGHV1-2P23083 117 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 LORP23490 312 aaPredicted RBP9.15□□□□□ -0.94
CCDC47-203ENST00000580986 CAPGP40121 348 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 CD79BP40259 229 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF84P51523 738 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 SNRPGP62308 76 aaKnown RBP9.15□□□□□ -0.94
CCDC47-203ENST00000580986 MRPS34P82930 218 aaKnown RBP9.15□□□□□ -0.94
CCDC47-203ENST00000580986 GLO1Q04760 184 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 FAPQ12884 760 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 TMED1Q13445 227 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 CRMP1Q14194 572 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 SNAPC1Q16533 368 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 SLC35D3Q5M8T2 416 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 SLC35F1Q5T1Q4 408 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 SFRP5Q5T4F7 317 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 NXNL2Q5VZ03 156 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 TMEM236Q5W0B7 351 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 STAC2Q6ZMT1 411 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 LINGO2Q7L985 606 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 DPPA2Q7Z7J5 298 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 UBE2J2Q8N2K1 259 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 IQCF1Q8N6M8 205 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF433Q8N7K0 673 aaPredicted RBP9.15□□□□□ -0.94
CCDC47-203ENST00000580986 SYT14Q8NB59 555 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 SETD9Q8NE22 299 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 SDR9C7Q8NEX9 313 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 OR4K13Q8NH42 304 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 TMEM163Q8TC26 289 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 SSC4DQ8WTU2 575 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 TFAP2CQ92754 450 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 RNASE6Q93091 150 aaKnown RBP9.15□□□□□ -0.94
CCDC47-203ENST00000580986 PLEKHA8Q96JA3 519 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 MUS81Q96NY9 551 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 FOXB1Q99853 325 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 APOL4Q9BPW4 351 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 RBM24Q9BX46 236 aaKnown RBP9.15□□□□□ -0.94
CCDC47-203ENST00000580986 OPN3Q9H1Y3 402 aaPredicted RBP9.15□□□□□ -0.94
CCDC47-203ENST00000580986 CRLF2Q9HC73 371 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 OBP2BQ9NPH6 170 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 IMPAD1Q9NX62 359 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 MOKQ9UQ07 419 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 GMPPBQ9Y5P6 360 aa9.15□□□□□ -0.94
CCDC47-203ENST00000580986 FLNCQ14315 2725 aa9.15□□□□□ -0.95
CCDC47-203ENST00000580986 DIDO1Q9BTC0 2240 aaKnown RBP9.15□□□□□ -0.95
CCDC47-203ENST00000580986 IGLV1-36A0A0B4J1U3 117 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 PRR23D1E9PI22 279 aaPredicted RBP9.14□□□□□ -0.95
CCDC47-203ENST00000580986 KHDRBS3O75525 346 aaKnown RBP9.14□□□□□ -0.95
CCDC47-203ENST00000580986 AGFG2O95081 481 aa9.14□□□□□ -0.95
CCDC47-203ENST00000580986 PRR23D2P0DMB1 279 aaPredicted RBP9.14□□□□□ -0.95
CCDC47-203ENST00000580986 CTLA4P16410 223 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms