RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 GRNP28799 593 aaKnown RBP13.68□□□□□ -0.22
SS18-216ENST00000580751 RPL27P61353 136 aaKnown RBP13.68□□□□□ -0.22
SS18-216ENST00000580751 FAM27E3Q08E93 113 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 ITGADQ13349 1161 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 ARMC4Q5T2S8 1044 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 TSPO2Q5TGU0 170 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 NXNL2Q5VZ03 156 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 GID4Q8IVV7 300 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 GPR137CQ8N3F9 429 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 ARIH2OSQ8N7S6 290 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 TCEANCQ8N8B7 351 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 FNDC8Q8TC99 324 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 IPCEF1Q8WWN9 437 aaPredicted RBP13.68□□□□□ -0.22
SS18-216ENST00000580751 KISS1RQ969F8 398 aaPredicted RBP13.68□□□□□ -0.22
SS18-216ENST00000580751 SLC25A44Q96H78 314 aaPredicted RBP13.68□□□□□ -0.22
SS18-216ENST00000580751 LRR1Q96L50 414 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 EMC6Q9BV81 110 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 HDHD5Q9BXW7 423 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 ZNF696Q9H7X3 374 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 SLC24A3Q9HC58 644 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 B3GAT2Q9NPZ5 323 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 SLC7A10Q9NS82 523 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 PLEKHB1Q9UF11 243 aaPredicted RBP13.68□□□□□ -0.22
SS18-216ENST00000580751 TPRKBQ9Y3C4 175 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 IER3IP1Q9Y5U9 82 aa13.68□□□□□ -0.22
SS18-216ENST00000580751 FLNBO75369 2602 aaKnown RBP13.67□□□□□ -0.22
SS18-216ENST00000580751 IRGMA1A4Y4 181 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 ZNF587BE7ETH6 402 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 C19orf84I3L1E1 186 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 PRODHO43272 600 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 PRKYO43930 277 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 WBP4O75554 376 aaKnown RBP13.67□□□□□ -0.22
SS18-216ENST00000580751 IGHG1P01857 330 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 NR2C1P13056 603 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 IGFBP2P18065 325 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 COX5AP20674 150 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 UGT2B10P36537 528 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 CSNK1A1P48729 337 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 CENPAP49450 140 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 SLC25A1P53007 311 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 GABARAPL2P60520 117 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 FAPQ12884 760 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 MELKQ14680 651 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 ZNF362Q5T0B9 420 aaPredicted RBP13.67□□□□□ -0.22
SS18-216ENST00000580751 AADACL4Q5VUY2 407 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 CARD17Q5XLA6 110 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 STAC2Q6ZMT1 411 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 IGFN1Q86VF2 1251 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 CXorf67Q86X51 503 aaPredicted RBP13.67□□□□□ -0.22
SS18-216ENST00000580751 ZNF786Q8N393 782 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 OR6N1Q8NGY5 312 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 APH1BQ8WW43 257 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 ASB10Q8WXI3 467 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 ALKBH3Q96Q83 286 aaPredicted RBP13.67□□□□□ -0.22
SS18-216ENST00000580751 USB1Q9BQ65 265 aaKnown RBP13.67□□□□□ -0.22
SS18-216ENST00000580751 OR10A4Q9H209 315 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 CCNB1IP1Q9NPC3 277 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 RASSF1Q9NS23 344 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 TAS2R16Q9NYV7 291 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 IL20RAQ9UHF4 553 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.67□□□□□ -0.22
SS18-216ENST00000580751 GPR52Q9Y2T5 361 aa13.67□□□□□ -0.22
SS18-216ENST00000580751 RPL36Q9Y3U8 105 aaKnown RBP13.67□□□□□ -0.22
SS18-216ENST00000580751 ALPK2Q86TB3 2170 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 PRR23D1E9PI22 279 aaPredicted RBP13.66□□□□□ -0.22
SS18-216ENST00000580751 XKRYO14609 159 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 UPK3AO75631 287 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 PRR23D2P0DMB1 279 aaPredicted RBP13.66□□□□□ -0.22
SS18-216ENST00000580751 PPP3CBP16298 524 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 IGHV1-2P23083 117 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 IL32P24001 234 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 MPGP29372 298 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 CCKARP32238 428 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 ERVK-25P63136 954 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 TGFBR3Q03167 851 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 CAMK2DQ13557 499 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 SFRP5Q5T4F7 317 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 C20orf196Q8IYI0 205 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 ACBD4Q8NC06 268 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 NOXO1Q8NFA2 376 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 STEAP2Q8NFT2 490 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 ZNF519Q8TB69 540 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 TSPAN32Q96QS1 320 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 DDOQ99489 341 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 SPOCK3Q9BQ16 436 aa13.66□□□□□ -0.22
SS18-216ENST00000580751 MRPS18AQ9NVS2 196 aaKnown RBP13.66□□□□□ -0.22
SS18-216ENST00000580751 CNOT2Q9NZN8 540 aaKnown RBP13.66□□□□□ -0.22
SS18-216ENST00000580751 H2AFY2Q9P0M6 372 aaPredicted RBP13.66□□□□□ -0.22
SS18-216ENST00000580751 ZNF346Q9UL40 294 aaKnown RBP13.66□□□□□ -0.22
SS18-216ENST00000580751 ASH1LQ9NR48 2969 aaKnown RBP13.65□□□□□ -0.22
SS18-216ENST00000580751 EFCAB10A6NFE3 127 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 TUBAL3A6NHL2 446 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 SLC22A31A6NKX4 558 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 SLC1A7O00341 560 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 LYNP07948 512 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 PGA4P0DJD7 388 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 PGA3P0DJD8 388 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 PIPP12273 146 aaPredicted RBP13.65□□□□□ -0.22
SS18-216ENST00000580751 HIST1H1CP16403 213 aaKnown RBP13.65□□□□□ -0.22
SS18-216ENST00000580751 CRHBPP24387 322 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms