RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 SH3GLB1Q9Y371 365 aa12.46□□□□□ -0.41
SMARCE1-216ENST00000580419 H3BSA7 217 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 MRASO14807 208 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 PHF1O43189 567 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 IGHMP01871 453 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 ACADSP16219 412 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 KDELR2P33947 212 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 ARFIP2P53365 341 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 CDH15P55291 814 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 TAS2R41P59536 307 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 PIGFQ07326 219 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 ST3GAL3Q11203 375 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 GKAP1Q5VSY0 366 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 DEF8Q6ZN54 512 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 RNF113BQ8IZP6 322 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 SLC30A7Q8NEW0 376 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 C10orf82Q8WW14 230 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 LZICQ8WZA0 190 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 MCHR2Q969V1 340 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 SGTBQ96EQ0 304 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 ZNF416Q9BWM5 594 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 TXNIPQ9H3M7 391 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 INIPQ9NRY2 104 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 SLCO1C1Q9NYB5 712 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 MED31Q9Y3C7 131 aa12.45□□□□□ -0.42
SMARCE1-216ENST00000580419 B4DSR2 109 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 BLOC1S5-TXNDC5H3BN57 136 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 NDUFAB1O14561 156 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 AHCYL1O43865 530 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 SASH3O75995 380 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 TGFAP01135 160 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 TFP02787 698 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 MMP7P09237 267 aaPredicted RBP12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 DVL1P1P54792 670 aaPredicted RBP12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 CLRN1P58418 232 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 PLP2Q04941 152 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 RAB39AQ14964 217 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 MSMPQ1L6U9 139 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 TBC1D28Q2M2D7 210 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 CYBRD1Q53TN4 286 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 ELFN2Q5R3F8 820 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 SLC16A14Q7RTX9 510 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 OR2T12Q8NG77 320 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 PRRC1Q96M27 445 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 ALG12Q9BV10 488 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 ANKRD19PQ9H560 264 aa12.44□□□□□ -0.42
SMARCE1-216ENST00000580419 IQCMA0A1B0GVH7 501 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 ELOVL7A1L3X0 281 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 MCIDASD6RGH6 385 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 TRMUO75648 421 aaKnown RBP12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 UMPSP11172 480 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 TUBG1P23258 451 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 SLC9A3P48764 834 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 UCP2P55851 309 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 PIN1Q13526 163 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 THEM4Q5T1C6 240 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 FAM27BQ5VT28 67 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 RGS7BPQ6MZT1 257 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 FOXL2NBQ6ZUU3 175 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 SYT9Q86SS6 491 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 NKAIN4Q8IVV8 208 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 PHC2Q8IXK0 858 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 OFCC1Q8IZS5 231 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 ZCCHC24Q8N2G6 241 aaKnown RBP12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 RFLNBQ8N5W9 214 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 TEX29Q8N6K0 151 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 OR4K5Q8NGD3 323 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 RP9Q8TA86 221 aaKnown RBP12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 FGFBP3Q8TAT2 258 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 C11orf40Q8WZ69 217 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 THOC1Q96FV9 657 aaKnown RBP12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 KCNN2Q9H2S1 579 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 TUBG2Q9NRH3 451 aa12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 CGGBP1Q9UFW8 167 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-216ENST00000580419 A0A0A6YYJ9 748 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 C17orf100A8MU93 164 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 KPNA4O00629 521 aaPredicted RBP12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 RP2O75695 350 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 SERPINI2O75830 405 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 IGHV3-13P01766 116 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 ADH4P08319 380 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 APEX1P27695 318 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 LIPAP38571 399 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 KLF3P57682 345 aaPredicted RBP12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 TEKQ02763 1124 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 MELKQ14680 651 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 CARTPTQ16568 116 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 MICU2Q8IYU8 434 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 RBM15BQ8NDT2 890 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 SYNPRQ8TBG9 265 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 TMEM255BQ8WV15 326 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 ZNF347Q96SE7 839 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 SH3GL3Q99963 347 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 HOPXQ9BPY8 73 aaPredicted RBP12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 CDH20Q9HBT6 801 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 C20orf141Q9NUB4 165 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 FGFR1OP2Q9NVK5 253 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 A4GNTQ9UNA3 340 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 UGT2A1Q9Y4X1 527 aa12.42□□□□□ -0.42
SMARCE1-216ENST00000580419 CAPN7Q9Y6W3 813 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms