RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	ZNF43	P17038	809 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	TNFSF4	P23510	183 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	RYK	P34925	604 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	CFHR2	P36980	270 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	FNTA	P49354	379 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	POLR2H	P52434	150 aa	Known RBP	4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	UCP2	P55851	309 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	CLDN17	P56750	224 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	TNFAIP6	P98066	277 aa	Predicted RBP	4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	BTK	Q06187	659 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	DLG1	Q12959	904 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	TRAF3	Q13114	568 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	PMS2P3	Q13401	168 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	GPR68	Q15743	365 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	ZNF718	Q3SXZ3	478 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	TCTEX1D4	Q5JR98	221 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	METTL11B	Q5VVY1	283 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	KLC3	Q6P597	504 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	ZNF813	Q6ZN06	617 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	EIF3M	Q7L2H7	374 aa	Known RBP	4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	RNF130	Q86XS8	419 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	ZNF283	Q8N7M2	679 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	ANKRD42	Q8N9B4	389 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	PIK3C3	Q8NEB9	887 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	OR1J2	Q8NGS2	313 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	GATAD1	Q8WUU5	269 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	GEMIN6	Q8WXD5	167 aa	Known RBP	4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	LHX4	Q969G2	390 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	MAGOHB	Q96A72	148 aa	Known RBP	4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	CCDC126	Q96EE4	140 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	APIP	Q96GX9	242 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	GPR22	Q99680	433 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	RANBP3	Q9H6Z4	567 aa	Predicted RBP	4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	RAB18	Q9NP72	206 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	EXD2	Q9NVH0	621 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	ADPRHL2	Q9NX46	363 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	TBK1	Q9UHD2	729 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	RCE1	Q9Y256	329 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	RASD1	Q9Y272	281 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	POFUT2	Q9Y2G5	429 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158	TMED7	Q9Y3B3	224 aa		4.92	□□□□□ -1.62
KPNB1-209	ENST00000580158		A0A1W2PRX2	142 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	TMEM72	A0PK05	275 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	NPIPB9	F8W1W9	429 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	GOLGA6L22	H0YM25	854 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158		M0R3G1	203 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	GSTA4	O15217	222 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	SLC25A17	O43808	307 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	RAMP3	O60896	148 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	ENTPD5	O75356	428 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	MBD3	O95983	291 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	PAH	P00439	452 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	THY1	P04216	161 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	HMGN2	P05204	90 aa	Known RBP	4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	CD55	P08174	381 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	ADH4	P08319	380 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	QDPR	P09417	244 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	CCDC159	P0C7I6	412 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	THRB	P10828	461 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	CHAT	P28329	748 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	CRABP2	P29373	138 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	HMOX2	P30519	316 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	SPR	P35270	261 aa	Predicted RBP	4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	CRAT	P43155	626 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	IDH2	P48735	452 aa	Known RBP	4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	PITPNB	P48739	271 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	ERVS71-1	P61550	626 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	DGCR2	P98153	550 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	LASP1	Q14847	261 aa	Known RBP	4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	PPP1R7	Q15435	360 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	TBC1D28	Q2M2D7	210 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	SPDYA	Q5MJ70	313 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	CD276	Q5ZPR3	534 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	FAM71E1	Q6IPT2	247 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	ZNF774	Q6NX45	483 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	CCDC137	Q6PK04	289 aa	Known RBP	4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	UNQ6126/PRO20091	Q6UXV3	157 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	SATL1	Q86VE3	508 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	CALHM3	Q86XJ0	350 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	EPHX4	Q8IUS5	362 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	SLC30A7	Q8NEW0	376 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	OR1J1	Q8NGS3	322 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	C8orf46	Q8TAG6	207 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	GRK7	Q8WTQ7	553 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	NPRL2	Q8WTW4	380 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	PHF21B	Q96EK2	531 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	SAMD8	Q96LT4	415 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	WDFY2	Q96P53	400 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	GPR78	Q96P69	363 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	PRPF18	Q99633	342 aa	Known RBP	4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	CPNE1	Q99829	537 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	DCTN5	Q9BTE1	182 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	MCRIP2	Q9BUT9	160 aa	Known RBP	4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	C1orf198	Q9H425	327 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	ZMAT4	Q9H898	229 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	B3GAT2	Q9NPZ5	323 aa		4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	ZCCHC3	Q9NUD5	404 aa	Known RBP	4.91	□□□□□ -1.62
KPNB1-209	ENST00000580158	DCAF16	Q9NXF7	216 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms