RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 PCDHGA5Q9Y5G8 931 aa9.48□□□□□ -0.89
TOP3A-209ENST00000580095 OR4C45A6NMZ5 311 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 C10orf142B7Z368 130 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 SMAD9O15198 467 aaKnown RBP9.47□□□□□ -0.89
TOP3A-209ENST00000580095 KRT33AO76009 404 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 TACSTD2P09758 323 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 ALOX5APP20292 161 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 DNASE1P24855 282 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 KIR3DL2P43630 455 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 BLVRAP53004 296 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 BIKQ13323 160 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 SERTAD2Q14140 314 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 LGALSLQ3ZCW2 172 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-209ENST00000580095 WDR38Q5JTN6 314 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 HLA-DQA1Q5Y7H0 255 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 CREB3L2Q70SY1 520 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 LUZP2Q86TE4 346 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 BIVMQ86UB2 503 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 GKN2Q86XP6 184 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 DND1Q8IYX4 353 aaKnown RBP9.47□□□□□ -0.89
TOP3A-209ENST00000580095 OR8S1Q8NH09 359 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 METTL21AQ8WXB1 218 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 DVL3Q92997 716 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-209ENST00000580095 MARVELD3Q96A59 401 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 OR2M2Q96R28 347 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 GPX7Q96SL4 187 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-209ENST00000580095 INTS14Q96SY0 518 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 DPYSL5Q9BPU6 564 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 SLC19A3Q9BZV2 496 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 ZMAT3Q9HA38 289 aaKnown RBP9.47□□□□□ -0.89
TOP3A-209ENST00000580095 DLL4Q9NR61 685 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 KLHL9Q9P2J3 617 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 ZNF69Q9UC07 566 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 ATXN7L1Q9ULK2 861 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-209ENST00000580095 FREM3P0C091 2139 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 ZNF98A6NK75 572 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 XKRYO14609 159 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 TSPAN4O14817 238 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 SIX6O95475 246 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 IGKV3-11P04433 115 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 ALDOBP05062 364 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 CTLA4P16410 223 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 PSMB1P20618 241 aaKnown RBP9.47□□□□□ -0.89
TOP3A-209ENST00000580095 ART1P52961 327 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 TAS2R20P59543 309 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 CAMK2DQ13557 499 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 EBPQ15125 230 aaKnown RBP9.47□□□□□ -0.89
TOP3A-209ENST00000580095 C4orf46Q504U0 113 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 FAM69BQ5VUD6 431 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 LRRTM1Q86UE6 522 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 WDFY1Q8IWB7 410 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 OR56B4Q8NH76 319 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 FBXW5Q969U6 566 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 SLC46A1Q96NT5 459 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.47□□□□□ -0.89
TOP3A-209ENST00000580095 TAS2R10Q9NYW0 307 aa9.47□□□□□ -0.89
TOP3A-209ENST00000580095 PPIEQ9UNP9 301 aaKnown RBP9.47□□□□□ -0.89
TOP3A-209ENST00000580095 PDCD5O14737 125 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 SLC25A12O75746 678 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 CFDP00746 253 aaPredicted RBP9.46□□□□□ -0.89
TOP3A-209ENST00000580095 RENP00797 406 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 SELLP14151 372 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 ABCD3P28288 659 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 PER3P56645 1201 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 MFGE8Q08431 387 aaPredicted RBP9.46□□□□□ -0.89
TOP3A-209ENST00000580095 DMWDQ09019 674 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 CBFBQ13951 182 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 CD276Q5ZPR3 534 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 SLC22A10Q63ZE4 541 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 SLC6A19Q695T7 634 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 NHLRC1Q6VVB1 395 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 NLRC3Q7RTR2 1065 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 ZNF440Q8IYI8 595 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 ZNF680Q8NEM1 530 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 ST8SIA2Q92186 375 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 ZNF285Q96NJ3 590 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 NOX3Q9HBY0 568 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 CYB5R1Q9UHQ9 305 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 ZNF175Q9Y473 711 aa9.46□□□□□ -0.89
TOP3A-209ENST00000580095 A0A1W2PR77 199 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 CIB4A0PJX0 185 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 GABARAPH6UMI1 98 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 ZNF354AO60765 605 aaPredicted RBP9.46□□□□□ -0.9
TOP3A-209ENST00000580095 NOS1APO75052 506 aaPredicted RBP9.46□□□□□ -0.9
TOP3A-209ENST00000580095 MPC2O95563 127 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 IGLV3-19P01714 112 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 ITGA5P08648 1049 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 SULT1A3P0DMM9 295 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 SULT1A4P0DMN0 295 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 SLC25A1P53007 311 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 FMODQ06828 376 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 IL10RAQ13651 578 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 ZMYND11Q15326 602 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 TCTE1Q5JU00 501 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 ARHGAP40Q5TG30 622 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 EEF1A1P5Q5VTE0 462 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 SYT13Q7L8C5 426 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 MRPL48Q96GC5 212 aaKnown RBP9.46□□□□□ -0.9
TOP3A-209ENST00000580095 KLHL15Q96M94 604 aa9.46□□□□□ -0.9
TOP3A-209ENST00000580095 LRFN5Q96NI6 719 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms