RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 RAB40BQ12829 278 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 GGTLC2Q14390 218 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 HSPB2Q16082 182 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 KCTD21Q4G0X4 260 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 LINC01590Q5TEZ4 76 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 LRFN4Q6PJG9 635 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 GCNT2Q8N0V5 402 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 CNEP1R1Q8N9A8 125 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 KISS1RQ969F8 398 aaPredicted RBP9.49□□□□□ -0.89
SS18-213ENST00000579640 RNFT2Q96EX2 444 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 SFXN3Q9BWM7 321 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 CCNB1IP1Q9NPC3 277 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 UPB1Q9UBR1 384 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 PSORS1C1Q9UIG5 152 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 PCDHGB1Q9Y5G3 927 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 ALPK2Q86TB3 2170 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 PHF3Q92576 2039 aaKnown RBP9.49□□□□□ -0.89
SS18-213ENST00000579640 COL6A6A6NMZ7 2263 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 BOD1L1Q8NFC6 3051 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 TRGV8A0A0C4DH27 118 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 RPL36A-HNRNPH2H7BZ11 118 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 DHHO43323 396 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 XPNPEP2O43895 674 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 MRPS14O60783 128 aaKnown RBP9.49□□□□□ -0.89
SS18-213ENST00000579640 UPK3AO75631 287 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 IL18BPO95998 194 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 STSP08842 583 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 CTSSP25774 331 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 GSTT1P30711 240 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 PYCR1P32322 319 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 GUCA1AP43080 201 aaPredicted RBP9.49□□□□□ -0.89
SS18-213ENST00000579640 SLC15A1P46059 708 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 SIRPAP78324 504 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 TSPO2Q5TGU0 170 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 C3P1Q6ZMU1 363 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 GLB1L2Q8IW92 636 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 RPRMLQ8N4K4 120 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 GALNT11Q8NCW6 608 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 ZNF540Q8NDQ6 660 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 OR6K6Q8NGW6 343 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 MYDGFQ969H8 173 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 DUSP21Q9H596 190 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 RERGLQ9H628 205 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 ZNF696Q9H7X3 374 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 AMBNQ9NP70 447 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 PLSCR4Q9NRQ2 329 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 FKBP14Q9NWM8 211 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 MALT1Q9UDY8 824 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 COA3Q9Y2R0 106 aaPredicted RBP9.49□□□□□ -0.89
SS18-213ENST00000579640 IGKV1D-43A0A0B4J1Z2 117 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 ZNF587BE7ETH6 402 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 TNFSF13O75888 250 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 SMNDC1O75940 238 aaKnown RBP eCLIP9.48□□□□□ -0.89
SS18-213ENST00000579640 FADS2O95864 444 aaKnown RBP9.48□□□□□ -0.89
SS18-213ENST00000579640 HRGP04196 525 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 CD8BP10966 210 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 LAP3P28838 519 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 OPRM1P35372 400 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 ATP6V1E1P36543 226 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 SLC35A2P78381 396 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 HSF2Q03933 536 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 PMPCAQ10713 525 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 ETFDHQ16134 617 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 PHYHD1Q5SRE7 291 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 FBXW9Q5XUX1 488 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 TFAP2EQ6VUC0 442 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 FOXL2NBQ6ZUU3 175 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 OR51L1Q8NGJ5 315 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 NSMAFQ92636 917 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 GGHQ92820 318 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 ZMYND19Q96E35 227 aaPredicted RBP9.48□□□□□ -0.89
SS18-213ENST00000579640 ALKBH3Q96Q83 286 aaPredicted RBP9.48□□□□□ -0.89
SS18-213ENST00000579640 DMRTA2Q96SC8 542 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 CNN2Q99439 309 aaKnown RBP9.48□□□□□ -0.89
SS18-213ENST00000579640 RBM24Q9BX46 236 aaKnown RBP9.48□□□□□ -0.89
SS18-213ENST00000579640 C12orf49Q9H741 205 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 MARCH7Q9H992 704 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 CRLF2Q9HC73 371 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 GPR35Q9HC97 309 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 SLC7A10Q9NS82 523 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 SH3BGRL2Q9UJC5 107 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 PROCRQ9UNN8 238 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 OSGIN2Q9Y236 505 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 EXOGQ9Y2C4 368 aaKnown RBP9.48□□□□□ -0.89
SS18-213ENST00000579640 MEMO1Q9Y316 297 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 CHD6Q8TD26 2715 aa9.48□□□□□ -0.89
SS18-213ENST00000579640 TRIM64A6NGJ6 449 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 FAM171A2A8MVW0 826 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 B8ZZF3 427 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 HLA-DQA2P01906 255 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 SBK2P0C263 348 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 GAAP10253 952 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 NPR2P20594 1047 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 DCKP27707 260 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 SH3BGRP55822 239 aaPredicted RBP9.47□□□□□ -0.89
SS18-213ENST00000579640 ROR2Q01974 943 aaKnown RBP9.47□□□□□ -0.89
SS18-213ENST00000579640 FOXF2Q12947 444 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 NRN1LQ496H8 165 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 VWA1Q6PCB0 445 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 AHSA2Q719I0 299 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms