RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 COPS7AQ9UBW8 275 aa12.4□□□□□ -0.43
NDEL1-204ENST00000578172 CHRNA9Q9UGM1 479 aa12.4□□□□□ -0.43
NDEL1-204ENST00000578172 MRM2Q9UI43 246 aaKnown RBP12.4□□□□□ -0.43
NDEL1-204ENST00000578172 B9D1Q9UPM9 204 aa12.4□□□□□ -0.43
NDEL1-204ENST00000578172 COA3Q9Y2R0 106 aaPredicted RBP12.4□□□□□ -0.43
NDEL1-204ENST00000578172 NPFFR2Q9Y5X5 522 aa12.4□□□□□ -0.43
NDEL1-204ENST00000578172 EP300Q09472 2414 aaPredicted RBP12.39□□□□□ -0.43
NDEL1-204ENST00000578172 TMEM235A6NFC5 223 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 LEUTXA8MZ59 168 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 CD2P06729 351 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 ARFIP1P53367 373 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 TRAM1Q15629 374 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 DPY19L2P2Q6ZN68 376 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 BATF2Q8N1L9 274 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 GPR148Q8TDV2 347 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 AIFM2Q9BRQ8 373 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 LRRC61Q9BV99 259 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 OR2S2Q9NQN1 319 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 COL4A3Q01955 1670 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 A0A087WUJ7 227 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 C5orf51A6NDU8 294 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 PRAMEF26H0Y7S4 382 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 P2RY10O00398 339 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 PI3P19957 117 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 SLC2A5P22732 501 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 RABIFP47224 123 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 MGAT2Q10469 447 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 IDO2Q6ZQW0 420 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 LIX1LQ8IVB5 337 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 PDZD9Q8IXQ8 264 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 LSMEM1Q8N8F7 131 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 OR51A2Q8NGJ7 313 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 SP7Q8TDD2 431 aaPredicted RBP12.39□□□□□ -0.43
NDEL1-204ENST00000578172 KCNJ15Q99712 375 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 RTN4RQ9BZR6 473 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 GHITMQ9H3K2 345 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 SEMA6CQ9H3T2 930 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 ZFP64Q9NPA5 681 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 B3GNT2Q9NY97 397 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 TAS2R4Q9NYW5 299 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 PCDHGA5Q9Y5G8 931 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 METTL12A8MUP2 240 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 IL11P20809 199 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 PRPS1P60891 318 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 ACKR1Q16570 336 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 RSPO4Q2I0M5 234 aaPredicted RBP12.39□□□□□ -0.43
NDEL1-204ENST00000578172 RNLSQ5VYX0 342 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 FAM181AQ8N9Y4 354 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 OR10H5Q8NGA6 315 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 OR4C16Q8NGL9 310 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 OR13C3Q8NGS6 347 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 PHOSPHO2Q8TCD6 241 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 SMIM4Q8WVI0 70 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 KLRF1Q9NZS2 232 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 FBXL21Q9UKT6 434 aa12.39□□□□□ -0.43
NDEL1-204ENST00000578172 FOXS1O43638 330 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 AHSA1O95433 338 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 HLA-DOBP13765 273 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 PRSS3P35030 304 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 POU3F1Q03052 451 aaPredicted RBP12.38□□□□□ -0.43
NDEL1-204ENST00000578172 WBP2NLQ6ICG8 309 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 C8orf44Q96CB5 159 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 VSTM2LQ96N03 204 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 TRIM3O75382 744 aaPredicted RBP12.38□□□□□ -0.43
NDEL1-204ENST00000578172 MPC2O95563 127 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 FAUP35544 74 aaKnown RBP12.38□□□□□ -0.43
NDEL1-204ENST00000578172 FZD2Q14332 565 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 FHL5Q5TD97 284 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 TRILQ7L0X0 811 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 SPAG16Q8N0X2 631 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 OR2G2Q8NGZ5 317 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 ZNF417Q8TAU3 575 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 CXorf58Q96LI9 332 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 KLHL15Q96M94 604 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 ZNF587Q96SQ5 575 aaPredicted RBP12.38□□□□□ -0.43
NDEL1-204ENST00000578172 GSX2Q9BZM3 304 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 INPP5EQ9NRR6 644 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 AIPO00170 330 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 LMX1BO60663 402 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 KCNJ13O60928 360 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 PVALBP20472 110 aaPredicted RBP12.38□□□□□ -0.43
NDEL1-204ENST00000578172 TNFRSF4P43489 277 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 BLKP51451 505 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 WDR38Q5JTN6 314 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 MRGPREQ86SM8 312 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 FAM71F1Q96KD3 344 aaPredicted RBP12.38□□□□□ -0.43
NDEL1-204ENST00000578172 CFHR5Q9BXR6 569 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 PRR13Q9NZ81 148 aa12.38□□□□□ -0.43
NDEL1-204ENST00000578172 VSX1Q9NZR4 365 aaPredicted RBP12.38□□□□□ -0.43
NDEL1-204ENST00000578172 FARS2O95363 451 aaKnown RBP12.37□□□□□ -0.43
NDEL1-204ENST00000578172 ADRA2CP18825 462 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 RORAP35398 523 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 CHAF1BQ13112 559 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 RAB11BQ15907 218 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 OR14A16Q8NHC5 309 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 MAFIPQ8WZ33 124 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 RGP1Q92546 391 aaPredicted RBP12.37□□□□□ -0.43
NDEL1-204ENST00000578172 ELSPBP1Q96BH3 223 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 ZNF524Q96C55 264 aa12.37□□□□□ -0.43
NDEL1-204ENST00000578172 SLC25A38Q96DW6 304 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms