RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 USF1P22415 310 aaPredicted RBP13.91□□□□□ -0.18
VAPA-204ENST00000577901 CLRN1P58418 232 aa13.91□□□□□ -0.18
VAPA-204ENST00000577901 CHRNB3Q05901 458 aa13.91□□□□□ -0.18
VAPA-204ENST00000577901 TAF11Q15544 211 aa13.91□□□□□ -0.18
VAPA-204ENST00000577901 KRTAP24-1Q3LI83 254 aa13.91□□□□□ -0.18
VAPA-204ENST00000577901 CYP2R1Q6VVX0 501 aa13.91□□□□□ -0.18
VAPA-204ENST00000577901 OR52J3Q8NH60 311 aa13.91□□□□□ -0.18
VAPA-204ENST00000577901 OR51A7Q8NH64 312 aa13.91□□□□□ -0.18
VAPA-204ENST00000577901 NDEL1Q9GZM8 345 aa13.91□□□□□ -0.18
VAPA-204ENST00000577901 IL1RAPQ9NPH3 570 aa13.91□□□□□ -0.18
VAPA-204ENST00000577901 NPIPB13A6NJU9 1138 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 NPIPB4C9JG80 1138 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 GYG2O15488 501 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 ENTPD5O75356 428 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 LY6HO94772 140 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 UBOX5O94941 541 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 GADD45GO95257 159 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 PGA4P0DJD7 388 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 PGA3P0DJD8 388 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 ACADSP16219 412 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 APOBEC3AP31941 199 aaPredicted RBP13.9□□□□□ -0.18
VAPA-204ENST00000577901 CAPZA2P47755 286 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 SPIBQ01892 262 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 C3orf36Q3SXR2 165 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 DNAL1Q4LDG9 190 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 MEX3DQ86XN8 651 aaKnown RBP13.9□□□□□ -0.18
VAPA-204ENST00000577901 WDFY1Q8IWB7 410 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 ARIH2OSQ8N7S6 290 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 FAM169BQ8N8A8 192 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 ASB10Q8WXI3 467 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 DHRS1Q96LJ7 313 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 LRGUKQ96M69 825 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 FOXB1Q99853 325 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 THTPAQ9BU02 230 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 TXNIPQ9H3M7 391 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 PMF1-BGLAPU3KQ54 211 aa13.9□□□□□ -0.18
VAPA-204ENST00000577901 TRAV27A0A087WT01 109 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 LMX1BO60663 402 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 PDE5AO76074 875 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 QDPRP09417 244 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 NR2C1P13056 603 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 CBR1P16152 277 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 THBS2P35442 1172 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 ARR3P36575 388 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 GPR4P46093 362 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 CTXN1P60606 82 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 ZBED5Q49AG3 693 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 IQCCQ4KMZ1 466 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 ARMC4Q5T2S8 1044 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 LCN8Q6JVE9 175 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 LRFN4Q6PJG9 635 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 ZNF813Q6ZN06 617 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 ZNF627Q7L945 461 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 PIWIL3Q7Z3Z3 882 aaKnown RBP13.89□□□□□ -0.19
VAPA-204ENST00000577901 ZDHHC21Q8IVQ6 265 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 OR13C2Q8NGS9 318 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 ASB9Q96DX5 294 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 FAM46AQ96IP4 442 aaKnown RBP13.89□□□□□ -0.19
VAPA-204ENST00000577901 SLC38A2Q96QD8 506 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 SEPHS2Q99611 448 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 KCNS3Q9BQ31 491 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 MRPL13Q9BYD1 178 aaKnown RBP13.89□□□□□ -0.19
VAPA-204ENST00000577901 NELFAQ9H3P2 528 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 TMCC3Q9ULS5 477 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 AURKCQ9UQB9 309 aa13.89□□□□□ -0.19
VAPA-204ENST00000577901 TRBV4-1A0A0J9YWV2 114 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 DHHO43323 396 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 TRMUO75648 421 aaKnown RBP13.88□□□□□ -0.19
VAPA-204ENST00000577901 KRT36O76013 467 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 SEC14L2O76054 403 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 CRYAAP02489 173 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 SRD5A1P18405 259 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 ATP6V1B2P21281 511 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 RPL4P36578 427 aaKnown RBP13.88□□□□□ -0.19
VAPA-204ENST00000577901 IFNGR2P38484 337 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 GZMKP49863 264 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 ZNF84P51523 738 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 RPL27P61353 136 aaKnown RBP13.88□□□□□ -0.19
VAPA-204ENST00000577901 TUBA1BP68363 451 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 TUBA4AP68366 448 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 RUNX1T1Q06455 604 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 HIST3H3Q16695 136 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 FAM205BPQ63HN1 556 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 TUBA1AQ71U36 451 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 SYT14Q8NB59 555 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 OR4K5Q8NGD3 323 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 FNDC8Q8TC99 324 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 MCHR2Q969V1 340 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 TRIM15Q9C019 465 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 MAGIXQ9H6Y5 334 aa13.88□□□□□ -0.19
VAPA-204ENST00000577901 CRNNQ9UBG3 495 aaPredicted RBP13.88□□□□□ -0.19
VAPA-204ENST00000577901 ZNF346Q9UL40 294 aaKnown RBP13.88□□□□□ -0.19
VAPA-204ENST00000577901 IGHV1-18A0A0C4DH31 117 aa13.87□□□□□ -0.19
VAPA-204ENST00000577901 SH3PXD2BA1X283 911 aa13.87□□□□□ -0.19
VAPA-204ENST00000577901 A6NIZ1 184 aa13.87□□□□□ -0.19
VAPA-204ENST00000577901 ATP6V1G2-DDX39BF2Z307 99 aa13.87□□□□□ -0.19
VAPA-204ENST00000577901 CDC42EP2O14613 210 aa13.87□□□□□ -0.19
VAPA-204ENST00000577901 FARS2O95363 451 aaKnown RBP13.87□□□□□ -0.19
VAPA-204ENST00000577901 IGKV3-15P01624 115 aa13.87□□□□□ -0.19
VAPA-204ENST00000577901 IGHMP01871 453 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms