RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 STK38LQ9Y2H1 464 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 CHTOPQ9Y3Y2 248 aaKnown RBP1.73□□□□□ -2.13
COPS3-213ENST00000577210 NEUROG3Q9Y4Z2 214 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 FER1L5A0AVI2 2057 aa1.73□□□□□ -2.13
COPS3-213ENST00000577210 MROH5Q6ZUA9 1318 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 GJE1A6NN92 205 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 USP27XA6NNY8 438 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 F6UB75 175 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 PES1O00541 588 aaKnown RBP1.72□□□□□ -2.13
COPS3-213ENST00000577210 BCKDKO14874 412 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 SOX15O60248 233 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 TNFSF13O75888 250 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 SCELO95171 688 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 TGM6O95932 706 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 CD160O95971 181 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 CSTAP01040 98 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 C2P06681 752 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 GIPP09681 153 aaPredicted RBP1.72□□□□□ -2.13
COPS3-213ENST00000577210 ACSM4P0C7M7 580 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 ICAM2P13598 275 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 ADRB3P13945 408 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 MDKP21741 143 aaPredicted RBP1.72□□□□□ -2.13
COPS3-213ENST00000577210 CASQ1P31415 396 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 NUP62P37198 522 aaPredicted RBP1.72□□□□□ -2.13
COPS3-213ENST00000577210 SLC26A3P40879 764 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 SLC1A1P43005 524 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 ETV1P50549 477 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 RORCP51449 518 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 CAV2P51636 162 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 CRISP1P54107 249 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 CARD18P57730 90 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 PRPS1P60891 318 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 RAB10P61026 200 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 RAB11AP62491 216 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 XIAPP98170 497 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 SPAG1Q07617 926 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 IFT88Q13099 833 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 RAB11BQ15907 218 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 NRF1Q16656 503 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 ZSCAN26Q16670 478 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 KCTD19Q17RG1 926 aaPredicted RBP1.72□□□□□ -2.13
COPS3-213ENST00000577210 ZNF658BQ4V348 819 aaPredicted RBP1.72□□□□□ -2.13
COPS3-213ENST00000577210 COA6Q5JTJ3 125 aaKnown RBP1.72□□□□□ -2.13
COPS3-213ENST00000577210 PAGE3Q5JUK9 113 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 C1orf100Q5SVJ3 147 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 C6orf183Q5T699 404 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 C12orf54Q6X4T0 127 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 MBOAT1Q6ZNC8 495 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 SLC25A48Q6ZT89 311 aaKnown RBP1.72□□□□□ -2.13
COPS3-213ENST00000577210 CAMK2N1Q7Z7J9 78 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 ZNF546Q86UE3 836 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 PNKDQ8N490 385 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 PRELID2Q8N945 189 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 OR1N2Q8NGR9 330 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 OR52E5Q8NH55 327 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 OR9G1Q8NH87 305 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 MCOLN3Q8TDD5 553 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 GPX8Q8TED1 209 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 GLYATL2Q8WU03 294 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 NDRG1Q92597 394 aaKnown RBP1.72□□□□□ -2.13
COPS3-213ENST00000577210 ARPC1AQ92747 370 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 C8orf44Q96CB5 159 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 DYNLL2Q96FJ2 89 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 KCTD14Q9BQ13 255 aaPredicted RBP1.72□□□□□ -2.13
COPS3-213ENST00000577210 SLC25A39Q9BZJ4 359 aaPredicted RBP1.72□□□□□ -2.13
COPS3-213ENST00000577210 OR11A1Q9GZK7 315 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 OR2AG1Q9H205 316 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 NEUROG2Q9H2A3 272 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 FBXO44Q9H4M3 255 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 RGCCQ9H4X1 137 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 EML4Q9HC35 981 aaKnown RBP1.72□□□□□ -2.13
COPS3-213ENST00000577210 KCNJ16Q9NPI9 418 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 EXD2Q9NVH0 621 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 CALYQ9NYX4 217 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 GNPTGQ9UJJ9 305 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 RAB26Q9ULW5 256 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 SLC17A4Q9Y2C5 497 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 NEURL4Q96JN8 1562 aa1.72□□□□□ -2.13
COPS3-213ENST00000577210 THSD7BQ9C0I4 1608 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 ZNF816-ZNF321PA0A0X1KG74 233 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 LINC00854A0A1B0GVQ3 168 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 A0A1B0GW55 424 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 PSMB11A5LHX3 300 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 C12orf71A8MTZ7 269 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 SERPINE3A8MV23 424 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 FAM25EA8MYX2 175 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 M0R3G1 203 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 SIRPB1O00241 398 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 SLC9A3R1O14745 358 aaPredicted RBP1.71□□□□□ -2.14
COPS3-213ENST00000577210 SIVA1O15304 175 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 SLC31A2O15432 143 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 MGRN1O60291 552 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 FAM189A1O60320 539 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 EIF4E2O60573 245 aaKnown RBP1.71□□□□□ -2.14
COPS3-213ENST00000577210 ICOSLGO75144 302 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 FCN3O75636 299 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 CLPXO76031 633 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 OTCP00480 354 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 IFNW1P05000 195 aa1.71□□□□□ -2.14
COPS3-213ENST00000577210 ALDOBP05062 364 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms