RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 SEC14L2O76054 403 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 ATP6V1G2O95670 118 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 RENP00797 406 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 HMGN1P05114 100 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 IL32P24001 234 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 RAD23AP54725 363 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 ARF1P84077 181 aaKnown RBP7.52□□□□□ -1.21
NUP88-211ENST00000575976 NPRL3Q12980 569 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 RIPK1Q13546 671 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 CRMP1Q14194 572 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 ETFDHQ16134 617 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 GABRA6Q16445 453 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 KRTAP21-3Q3LHN1 58 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 THEM4Q5T1C6 240 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 OGFRL1Q5TC84 451 aaPredicted RBP7.52□□□□□ -1.21
NUP88-211ENST00000575976 ADCK1Q86TW2 530 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 GALNT4Q8N4A0 578 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 CYB561A3Q8NBI2 242 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 SLC37A3Q8NCC5 494 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 NPEPL1Q8NDH3 523 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 STEAP2Q8NFT2 490 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 OR1K1Q8NGR3 316 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 LINC01560Q8TB33 94 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 FNDC8Q8TC99 324 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 NRG4Q8WWG1 115 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 NSMAFQ92636 917 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 KISS1RQ969F8 398 aaPredicted RBP7.52□□□□□ -1.21
NUP88-211ENST00000575976 MUS81Q96NY9 551 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 TSSK2Q96PF2 358 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 SNX18Q96RF0 628 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 MBOAT4Q96T53 435 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 FOXB1Q99853 325 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 HDHD5Q9BXW7 423 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 GABARAPL3Q9BY60 117 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 NUAK2Q9H093 628 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 SYT4Q9H2B2 425 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 NELFAQ9H3P2 528 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 FN3KQ9H479 309 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 SRA1Q9HD15 236 aaKnown RBP7.52□□□□□ -1.21
NUP88-211ENST00000575976 TVP23BQ9NYZ1 205 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 VSX1Q9NZR4 365 aaPredicted RBP7.52□□□□□ -1.21
NUP88-211ENST00000575976 ENOPH1Q9UHY7 261 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 KLHL21Q9UJP4 597 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 PCNX1Q96RV3 2341 aa7.52□□□□□ -1.21
NUP88-211ENST00000575976 NF1P21359 2839 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 A0A096LPE4 126 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 A0A1W2PPZ6 126 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 A0A1W2PR80 420 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 ZNF99A8MXY4 864 aaPredicted RBP7.51□□□□□ -1.21
NUP88-211ENST00000575976 DCTN6O00399 190 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 DLGAP1O14490 977 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 SURF4O15260 269 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 SLC16A7O60669 478 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 KHDRBS3O75525 346 aaKnown RBP7.51□□□□□ -1.21
NUP88-211ENST00000575976 SNAP29O95721 258 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 IFNGP01579 166 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 NR2C1P13056 603 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 CTLA4P16410 223 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 IGFBP2P18065 325 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 CDAP32320 146 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 ZNF84P51523 738 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 SORDQ00796 357 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 TGFBR3Q03167 851 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 STK11Q15831 433 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 TBRG1Q3YBR2 411 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 HIKESHIQ53FT3 197 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 C10orf128Q5T292 105 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 SLX4IPQ5VYV7 408 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 C12orf73Q69YU5 71 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 SP5Q6BEB4 398 aaPredicted RBP7.51□□□□□ -1.21
NUP88-211ENST00000575976 KLHL24Q6TFL4 600 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 C22orf34Q6ZV56 151 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 OR6V1Q8N148 313 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 WDR31Q8NA23 367 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 C1orf162Q8NEQ5 155 aaPredicted RBP7.51□□□□□ -1.21
NUP88-211ENST00000575976 HTRA1Q92743 480 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 BCL2L2Q92843 193 aaPredicted RBP7.51□□□□□ -1.21
NUP88-211ENST00000575976 S100PBPQ96BU1 408 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 FOXN4Q96NZ1 517 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 WFIKKN1Q96NZ8 548 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 ACTR6Q9GZN1 396 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 OR10A4Q9H209 315 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 TOR3AQ9H497 397 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 RERGLQ9H628 205 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 RPRD1BQ9NQG5 326 aaKnown RBP7.51□□□□□ -1.21
NUP88-211ENST00000575976 SLC17A5Q9NRA2 495 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 CMC2Q9NRP2 79 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 TMEM38BQ9NVV0 291 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 B9D1Q9UPM9 204 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 COA3Q9Y2R0 106 aaPredicted RBP7.51□□□□□ -1.21
NUP88-211ENST00000575976 UGT2A1Q9Y4X1 527 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 ORC6Q9Y5N6 252 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 ZFHX3Q15911 3703 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 ALPK2Q86TB3 2170 aa7.51□□□□□ -1.21
NUP88-211ENST00000575976 IGLV1-36A0A0B4J1U3 117 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 A0A1W2PPL8 197 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 TUBAL3A6NHL2 446 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 OR5H1A6NKK0 313 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 FAM183AA6NL82 134 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 RIIAD1A6NNX1 92 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms