RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 DGCR6LQ9BY27 220 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 RNF121Q9H920 327 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 ZNF556Q9HAH1 456 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 PDP1Q9P0J1 537 aaPredicted RBP13.28□□□□□ -0.28
LITAF-217ENST00000575426 POU2F3Q9UKI9 436 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 AP4S1Q9Y587 144 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 CDH10Q9Y6N8 788 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 FBN2P35556 2912 aa13.28□□□□□ -0.28
LITAF-217ENST00000575426 AKAP6Q13023 2319 aa13.27□□□□□ -0.28
LITAF-217ENST00000575426 IDH3BO43837 385 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 UBL3O95164 117 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 SLC2A10O95528 541 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 RAF1P04049 648 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 FCGR1AP12314 374 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 NPR2P20594 1047 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 FASP25445 335 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 ARR3P36575 388 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 IST1P53990 364 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 FXYD6P3P58550 94 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 FMODQ06828 376 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 PIGFQ07326 219 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 COX10Q12887 443 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 CCNIQ14094 377 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 SGCAQ16586 387 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 GSG1Q2KHT4 349 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 C3orf36Q3SXR2 165 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 NRN1LQ496H8 165 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 MESTQ5EB52 335 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 ADAM5Q6NVV9 412 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 SLC22A25Q6T423 547 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 DPPA2Q7Z7J5 298 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 ADCK1Q86TW2 530 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 FAM169BQ8N8A8 192 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 AKAP1Q92667 903 aaKnown RBP eCLIP13.27□□□□□ -0.29
LITAF-217ENST00000575426 FEVQ99581 238 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 BDH2Q9BUT1 245 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 LIME1Q9H400 295 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 DENND2DQ9H6A0 471 aaPredicted RBP13.27□□□□□ -0.29
LITAF-217ENST00000575426 EGLN3Q9H6Z9 239 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 SEC61A2Q9H9S3 476 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 TBC1D23Q9NUY8 699 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 ARMC1Q9NVT9 282 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 ST6GALNAC2Q9UJ37 374 aa13.27□□□□□ -0.29
LITAF-217ENST00000575426 RAI1Q7Z5J4 1906 aaPredicted RBP13.27□□□□□ -0.29
LITAF-217ENST00000575426 A0A1W2PPR1 153 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 SLC22A23A1A5C7 686 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 PRSS37A4D1T9 235 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 ARRDC5A6NEK1 342 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 H7C1C5 153 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 HS3ST1O14792 307 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 ARPC3O15145 178 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 RAB36O95755 333 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 TXNDC12O95881 172 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 RENP00797 406 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 HLA-HP01893 362 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 CRYAAP02489 173 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 ROS1P08922 2347 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 ANXA8P13928 327 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 LCN6P62502 163 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 RAB1AP62820 205 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 NOTCH2Q04721 2471 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 NPRL3Q12980 569 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 SLC36A2Q495M3 483 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 TMEM53Q6P2H8 277 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 PAMR1Q6UXH9 720 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 C20orf204Q6ZNR8 217 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 SLC16A14Q7RTX9 510 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 MDP1Q86V88 176 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 SKA3Q8IX90 412 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 LRRC18Q8N456 261 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 CLDN22Q8N7P3 220 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 IL17RDQ8NFM7 739 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 KBTBD8Q8NFY9 601 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 FBXW5Q969U6 566 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 UTP4Q969X6 686 aaKnown RBP13.26□□□□□ -0.29
LITAF-217ENST00000575426 NRBF2Q96F24 287 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 DUS3LQ96G46 650 aaKnown RBP13.26□□□□□ -0.29
LITAF-217ENST00000575426 SH3GL3Q99963 347 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 RERGLQ9H628 205 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 SIAEQ9HAT2 523 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 IL20Q9NYY1 176 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 FBXL3Q9UKT7 428 aa13.26□□□□□ -0.29
LITAF-217ENST00000575426 SPG11Q96JI7 2443 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 IGHV1-18A0A0C4DH31 117 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 A0A1W2PPL8 197 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 KHDRBS3O75525 346 aaKnown RBP13.25□□□□□ -0.29
LITAF-217ENST00000575426 CDAP32320 146 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 PTDSS1P48651 473 aaKnown RBP13.25□□□□□ -0.29
LITAF-217ENST00000575426 IDH3GP51553 393 aaPredicted RBP13.25□□□□□ -0.29
LITAF-217ENST00000575426 CDH11P55287 796 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 MRPS34P82930 218 aaKnown RBP13.25□□□□□ -0.29
LITAF-217ENST00000575426 ZNF672Q499Z4 452 aaPredicted RBP13.25□□□□□ -0.29
LITAF-217ENST00000575426 CLEC12AQ5QGZ9 265 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 DNM1P34Q6PK57 102 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 YTHDF3Q7Z739 585 aaKnown RBP13.25□□□□□ -0.29
LITAF-217ENST00000575426 TMEM179BQ7Z7N9 219 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 OR5K1Q8NHB7 308 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 NINJ1Q92982 152 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 NMD3Q96D46 503 aaKnown RBP13.25□□□□□ -0.29
LITAF-217ENST00000575426 NIPSNAP1Q9BPW8 284 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms