RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 ZNF207O43670 478 aaKnown RBP2.32□□□□□ -2.04
CDC27-216ENST00000574304 RHOBTB1O94844 696 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 ERLIN2O94905 339 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 SERPINB5P36952 375 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 CDKN2BP42772 138 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 MAGEA8P43361 318 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 RFX3P48380 749 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 CX3CR1P49238 355 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 FAM78AQ5JUQ0 283 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 TMEM135Q86UB9 458 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 CALHM3Q86XJ0 350 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 GMCL1P1Q8NEA9 526 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 FAM83FQ8NEG4 500 aaPredicted RBP2.32□□□□□ -2.04
CDC27-216ENST00000574304 LKAAEAR1Q8TD35 194 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 RNF139Q8WU17 664 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 ABHD3Q8WU67 409 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 L3HYPDHQ96EM0 354 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 ZNF382Q96SR6 550 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 TRIM62Q9BVG3 475 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 RPF2Q9H7B2 306 aaKnown RBP2.32□□□□□ -2.04
CDC27-216ENST00000574304 NMRAL1Q9HBL8 299 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 MRPS18BQ9Y676 258 aaKnown RBP2.32□□□□□ -2.04
CDC27-216ENST00000574304 TUBGCP6Q96RT7 1819 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 SNNO75324 88 aaPredicted RBP2.31□□□□□ -2.04
CDC27-216ENST00000574304 RP2O75695 350 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 CCNKO75909 580 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 HLA-DPB1P04440 258 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 C2P06681 752 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 GNAO1P09471 354 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 HRH1P35367 487 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 VHLP40337 213 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 RABL6Q3YEC7 729 aaPredicted RBP2.31□□□□□ -2.04
CDC27-216ENST00000574304 PHYHD1Q5SRE7 291 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 KDM7AQ6ZMT4 941 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 NOXO1Q8NFA2 376 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 CREB3L1Q96BA8 519 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 NEURL3Q96EH8 262 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 CNN2Q99439 309 aaKnown RBP2.31□□□□□ -2.04
CDC27-216ENST00000574304 P2RX4Q99571 388 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 TMEM59Q9BXS4 323 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 SYNDIG1Q9H7V2 258 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 DDX49Q9Y6V7 483 aaKnown RBP2.31□□□□□ -2.04
CDC27-216ENST00000574304 PTPRTO14522 1441 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 YEATS2Q9ULM3 1422 aa2.31□□□□□ -2.04
CDC27-216ENST00000574304 EIF3GO75821 320 aaKnown RBP eCLIP2.3□□□□□ -2.04
CDC27-216ENST00000574304 UTS2O95399 124 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 C1orf105O95561 183 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 CDKN1BP46527 198 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 CDH4P55283 916 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 ZNF816Q0VGE8 651 aaPredicted RBP2.3□□□□□ -2.04
CDC27-216ENST00000574304 TCP10Q12799 353 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 CCDC152Q4G0S7 254 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 CFAP157Q5JU67 520 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 UQCC3Q6UW78 93 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 HDDC2Q7Z4H3 204 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 OAFQ86UD1 273 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 ZSCAN30Q86W11 494 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 NECAP1Q8NC96 275 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 FAM3DQ96BQ1 224 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 NARS2Q96I59 477 aaKnown RBP2.3□□□□□ -2.04
CDC27-216ENST00000574304 PSKH2Q96QS6 385 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 FMO2Q99518 471 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 DOK1Q99704 481 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 RNF5Q99942 180 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 SH3GL1Q99961 368 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 ERP44Q9BS26 406 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 TMEM43Q9BTV4 400 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 SLC25A2Q9BXI2 301 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 PARP12Q9H0J9 701 aaKnown RBP2.3□□□□□ -2.04
CDC27-216ENST00000574304 UBE2ZQ9H832 354 aaPredicted RBP2.3□□□□□ -2.04
CDC27-216ENST00000574304 SH3BGRL2Q9UJC5 107 aa2.3□□□□□ -2.04
CDC27-216ENST00000574304 COL27A1Q8IZC6 1860 aaPredicted RBP2.29□□□□□ -2.04
CDC27-216ENST00000574304 RAB3DO95716 219 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 OR56A5P0C7T3 313 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 CALM1P0DP23 149 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 CALM2P0DP24 149 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 CALM3P0DP25 149 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 FBXW4P57775 412 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 PITPNAQ00169 270 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 CDC20Q12834 499 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 MAB21L1Q13394 359 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 PDK3Q15120 406 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 ATAD3BQ5T9A4 648 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 DNAJC24Q6P3W2 148 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 CEMP1Q6PRD7 247 aaPredicted RBP2.29□□□□□ -2.04
CDC27-216ENST00000574304 PLEKHA8Q96JA3 519 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 TCHPQ9BT92 498 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 ZSCAN5AQ9BUG6 496 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
CDC27-216ENST00000574304 TNS2Q63HR2 1409 aa2.28□□□□□ -2.04
CDC27-216ENST00000574304 ZNF850A8MQ14 1090 aa2.28□□□□□ -2.04
CDC27-216ENST00000574304 CEACAM6P40199 344 aa2.28□□□□□ -2.04
CDC27-216ENST00000574304 SSR1P43307 286 aaKnown RBP2.28□□□□□ -2.04
CDC27-216ENST00000574304 NUTF2P61970 127 aaKnown RBP2.28□□□□□ -2.04
CDC27-216ENST00000574304 ZNF77Q15935 545 aa2.28□□□□□ -2.04
CDC27-216ENST00000574304 RAET1LQ5VY80 246 aa2.28□□□□□ -2.04
CDC27-216ENST00000574304 PRMT9Q6P2P2 845 aa2.28□□□□□ -2.04
CDC27-216ENST00000574304 TEX43Q6ZNM6 134 aa2.28□□□□□ -2.04
CDC27-216ENST00000574304 LRRC74BQ6ZQY2 392 aa2.28□□□□□ -2.04
CDC27-216ENST00000574304 KRTAP13-1Q8IUC0 172 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms