RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 MSANTD1Q6ZTZ1 278 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 TUBA1AQ71U36 451 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 DHDDSQ86SQ9 333 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 AQP12AQ8IXF9 295 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 FNDC5Q8NAU1 212 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 OR7G2Q8NG99 324 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 OR9A2Q8NGT5 310 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 ST7LQ8TDW4 575 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 FOXRED1Q96CU9 486 aaPredicted RBP5.82□□□□□ -1.48
CHD3-213ENST00000571249 CNRIP1Q96F85 164 aaPredicted RBP5.82□□□□□ -1.48
CHD3-213ENST00000571249 ARL5BQ96KC2 179 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 ZNF681Q96N22 645 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 FRG2BQ96QU4 278 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 ACPTQ9BZG2 426 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 MMP28Q9H239 520 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 PRDM13Q9H4Q3 707 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 BRF2Q9HAW0 419 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 SLC7A10Q9NS82 523 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 NMRK1Q9NWW6 199 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 CMTM6Q9NX76 183 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 MRTO4Q9UKD2 239 aaKnown RBP5.82□□□□□ -1.48
CHD3-213ENST00000571249 PSME2Q9UL46 239 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 AP3M1Q9Y2T2 418 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 ZNF780BQ9Y6R6 833 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 TRBV5-3A0A0A0MS03 114 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 F8W735 103 aaPredicted RBP5.81□□□□□ -1.48
CHD3-213ENST00000571249 NR5A2O00482 541 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 GPR137BO60478 399 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 PDYNP01213 254 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 IGKV1D-16P01601 117 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 IL6P05231 212 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 ANXA2P07355 339 aaKnown RBP5.81□□□□□ -1.48
CHD3-213ENST00000571249 CELA3BP08861 270 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 BCKDHAP12694 445 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 ZNF12P17014 697 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 HOXB9P17482 250 aaPredicted RBP5.81□□□□□ -1.48
CHD3-213ENST00000571249 MPGP29372 298 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 HOXD3P31249 432 aaPredicted RBP5.81□□□□□ -1.48
CHD3-213ENST00000571249 RPL4P36578 427 aaKnown RBP5.81□□□□□ -1.48
CHD3-213ENST00000571249 MAGEB1P43366 347 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 EVX1P49640 407 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 SLC7A2P52569 658 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 PSMD4P55036 377 aaKnown RBP5.81□□□□□ -1.48
CHD3-213ENST00000571249 UBE2NP61088 152 aaKnown RBP5.81□□□□□ -1.48
CHD3-213ENST00000571249 VAMP2P63027 116 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 PHEXP78562 749 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 SNTB2Q13425 540 aaKnown RBP5.81□□□□□ -1.48
CHD3-213ENST00000571249 HERPUD1Q15011 391 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 PDK3Q15120 406 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 CPSF6Q16630 551 aaKnown RBP eCLIP5.81□□□□□ -1.48
CHD3-213ENST00000571249 NSUN5P1Q3KNT7 163 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 TBRG1Q3YBR2 411 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 KHDC1LQ5JSQ8 128 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 PAGE3Q5JUK9 113 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 CCNYL2Q5T2Q4 361 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 LRIF1Q5T3J3 769 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 OGFRL1Q5TC84 451 aaPredicted RBP5.81□□□□□ -1.48
CHD3-213ENST00000571249 TSPO2Q5TGU0 170 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 KRT80Q6KB66 452 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 NANOGP8Q6NSW7 305 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 CASP12Q6UXS9 341 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 BRD3OSQ6XYD6 125 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 RIMKLAQ8IXN7 391 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 PQLC1Q8N2U9 271 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 TMEM86BQ8N661 226 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 OR8J3Q8NGG0 315 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 B4GALNT2Q8NHY0 566 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 PHOSPHO1Q8TCT1 267 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 SLC26A7Q8TE54 656 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 SELENOMQ8WWX9 145 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 PYDC1Q8WXC3 89 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 DNAJC9Q8WXX5 260 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 DYRK2Q92630 601 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 TESCQ96BS2 214 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 CCDC124Q96CT7 223 aaKnown RBP5.81□□□□□ -1.48
CHD3-213ENST00000571249 NMD3Q96D46 503 aaKnown RBP5.81□□□□□ -1.48
CHD3-213ENST00000571249 SNX22Q96L94 193 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 ZNF570Q96NI8 536 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 OR5B2Q96R09 309 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 FOXB1Q99853 325 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 GAL3ST1Q99999 423 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 C1orf50Q9BV19 199 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 VCX3BQ9H321 246 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 ELOVL6Q9H5J4 265 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 NANOGQ9H9S0 305 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 HHATLQ9HCP6 504 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 Q9N2J8 555 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 NOX4Q9NPH5 578 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 FARSBQ9NSD9 589 aaKnown RBP5.81□□□□□ -1.48
CHD3-213ENST00000571249 ARMC1Q9NVT9 282 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 TAS2R9Q9NYW1 312 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 UBAP1Q9NZ09 502 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 ADA2Q9NZK5 511 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 ACTR3BQ9P1U1 418 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 CRNNQ9UBG3 495 aaPredicted RBP5.81□□□□□ -1.48
CHD3-213ENST00000571249 SCOCQ9UIL1 159 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 RIMS3Q9UJD0 308 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 ADAM29Q9UKF5 820 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 FOXJ3Q9UPW0 622 aa5.81□□□□□ -1.48
CHD3-213ENST00000571249 POLR3HQ9Y535 204 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms