RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ASB10Q8WXI3 467 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 ZNF566Q969W8 418 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 S100PBPQ96BU1 408 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 Q96M85 177 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 TSPAN32Q96QS1 320 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 PKP2Q99959 881 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 IFT27Q9BW83 186 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 ULBP2Q9BZM5 246 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 ACTR6Q9GZN1 396 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 TXNIPQ9H3M7 391 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 ZNF556Q9HAH1 456 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 S100A14Q9HCY8 104 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 B3GAT2Q9NPZ5 323 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 GRHPRQ9UBQ7 328 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 CUBNO60494 3623 aa11.66□□□□□ -0.54
CCDC40-205ENST00000571028 TEX13CA0A0J9YWL9 993 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 H3BNX3 289 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 H7C1C5 153 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 SOCS2O14508 198 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 SEC14L2O76054 403 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 IGHG1P01857 330 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 CD14P08571 375 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 ITGA5P08648 1049 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 TSPAN19P0C672 248 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 ACADSP16219 412 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 PPP3CBP16298 524 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 LOXP28300 417 aaPredicted RBP11.65□□□□□ -0.54
CCDC40-205ENST00000571028 SLC6A6P31641 620 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 FXYD6P3P58550 94 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 RPL27P61353 136 aaKnown RBP11.65□□□□□ -0.54
CCDC40-205ENST00000571028 LCN6P62502 163 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 CD47Q08722 323 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 P2RY6Q15077 328 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 CEACAM16Q2WEN9 425 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 RFX4Q33E94 735 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 ANKDD1AQ495B1 522 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 SHQ1Q6PI26 577 aaKnown RBP11.65□□□□□ -0.54
CCDC40-205ENST00000571028 ZNF771Q7L3S4 317 aaPredicted RBP11.65□□□□□ -0.54
CCDC40-205ENST00000571028 LINGO2Q7L985 606 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 ABHD12BQ7Z5M8 362 aaPredicted RBP11.65□□□□□ -0.54
CCDC40-205ENST00000571028 WFDC8Q8IUA0 241 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 CLDN22Q8N7P3 220 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 OR52L1Q8NGH7 329 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 AKAP1Q92667 903 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCDC40-205ENST00000571028 RASD2Q96D21 266 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 SLC25A44Q96H78 314 aaPredicted RBP11.65□□□□□ -0.54
CCDC40-205ENST00000571028 ADAD1Q96M93 576 aaKnown RBP11.65□□□□□ -0.54
CCDC40-205ENST00000571028 ZNF570Q96NI8 536 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 ERMAPQ96PL5 475 aaPredicted RBP11.65□□□□□ -0.54
CCDC40-205ENST00000571028 CRLF2Q9HC73 371 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 GPR35Q9HC97 309 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 TBC1D23Q9NUY8 699 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 MALT1Q9UDY8 824 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 GPR52Q9Y2T5 361 aa11.65□□□□□ -0.54
CCDC40-205ENST00000571028 ANK3Q12955 4377 aaKnown RBP11.65□□□□□ -0.55
CCDC40-205ENST00000571028 A0A096LPE4 126 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 A0A1W2PPZ6 126 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 OR6C65A6NJZ3 312 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 G3V2T6 193 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 H3BN98 237 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 GSTM3P21266 225 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 NOS3P29474 1203 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 ARF1P84077 181 aaKnown RBP11.64□□□□□ -0.55
CCDC40-205ENST00000571028 GK3PQ14409 553 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 SLC35F1Q5T1Q4 408 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 ARMC4Q5T2S8 1044 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 DPY19L2P2Q6ZN68 376 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 ZNF620Q6ZNG0 422 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 RASSF6Q6ZTQ3 369 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 HDDC2Q7Z4H3 204 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 ZDHHC13Q8IUH4 622 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 ZNF433Q8N7K0 673 aaPredicted RBP11.64□□□□□ -0.55
CCDC40-205ENST00000571028 NOXO1Q8NFA2 376 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 STEAP2Q8NFT2 490 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 OR52N5Q8NH56 324 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 NSMAFQ92636 917 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 HDAC2Q92769 488 aaKnown RBP11.64□□□□□ -0.55
CCDC40-205ENST00000571028 ZNF837Q96EG3 531 aaPredicted RBP11.64□□□□□ -0.55
CCDC40-205ENST00000571028 PLPPR2Q96GM1 343 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 CENPNQ96H22 339 aaPredicted RBP11.64□□□□□ -0.55
CCDC40-205ENST00000571028 KCNK17Q96T54 332 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 TSSK6Q9BXA6 273 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 C1QTNF6Q9BXI9 259 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 DGCR6LQ9BY27 220 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 PLA2G12AQ9BZM1 189 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 LINC00470Q9BZP3 86 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 RERGLQ9H628 205 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 SMURF2Q9HAU4 748 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 TAS2R16Q9NYV7 291 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 GLTPQ9NZD2 209 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 LPAR3Q9UBY5 353 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 POFUT2Q9Y2G5 429 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 CDH10Q9Y6N8 788 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 DSCAMO60469 2012 aa11.64□□□□□ -0.55
CCDC40-205ENST00000571028 PDLIM1O00151 329 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 XKRYO14609 159 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 WIPF1O43516 503 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 PLAUP00749 431 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 QDPRP09417 244 aa11.63□□□□□ -0.55
CCDC40-205ENST00000571028 ANXA8P13928 327 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms