RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 FGD3Q5JSP0 725 aa11.28□□□□□ -0.6
CNOT1-220ENST00000569916 VHLLQ6RSH7 139 aa11.28□□□□□ -0.6
CNOT1-220ENST00000569916 ZNF584Q8IVC4 421 aa11.28□□□□□ -0.6
CNOT1-220ENST00000569916 CDK20Q8IZL9 346 aa11.28□□□□□ -0.6
CNOT1-220ENST00000569916 IL17RDQ8NFM7 739 aa11.28□□□□□ -0.6
CNOT1-220ENST00000569916 OR4K5Q8NGD3 323 aa11.28□□□□□ -0.6
CNOT1-220ENST00000569916 ZNF519Q8TB69 540 aa11.28□□□□□ -0.6
CNOT1-220ENST00000569916 FAM46AQ96IP4 442 aaKnown RBP11.28□□□□□ -0.6
CNOT1-220ENST00000569916 NSL1Q96IY1 281 aa11.28□□□□□ -0.6
CNOT1-220ENST00000569916 SH3GL3Q99963 347 aa11.28□□□□□ -0.6
CNOT1-220ENST00000569916 SMURF2Q9HAU4 748 aa11.28□□□□□ -0.6
CNOT1-220ENST00000569916 ZNF346Q9UL40 294 aaKnown RBP11.28□□□□□ -0.6
CNOT1-220ENST00000569916 TMEM5Q9Y2B1 443 aa11.28□□□□□ -0.6
CNOT1-220ENST00000569916 UGT2A1Q9Y4X1 527 aa11.28□□□□□ -0.6
CNOT1-220ENST00000569916 CHD3Q12873 2000 aaKnown RBP11.27□□□□□ -0.61
CNOT1-220ENST00000569916 B2RBV5 119 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 SSX4O60224 188 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 FARS2O95363 451 aaKnown RBP11.27□□□□□ -0.61
CNOT1-220ENST00000569916 OR4A8P0C604 315 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 NR2C1P13056 603 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 ZNF35P13682 527 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 ITGA2P17301 1181 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 THBS4P35443 961 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 SERPINF1P36955 418 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 OMPP47874 163 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 NUDT6P53370 316 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 SNRPD2P62316 118 aaKnown RBP11.27□□□□□ -0.61
CNOT1-220ENST00000569916 CD47Q08722 323 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 SNTB2Q13425 540 aaKnown RBP11.27□□□□□ -0.61
CNOT1-220ENST00000569916 RAB39AQ14964 217 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 EFNB3Q15768 340 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 ZBED5Q49AG3 693 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 FAM205BPQ63HN1 556 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 KRT80Q6KB66 452 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 SLC25A47Q6Q0C1 308 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 RRM2BQ7LG56 351 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 CLDN22Q8N7P3 220 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 NABP1Q96AH0 204 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 ALG12Q9BV10 488 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 ADAM21Q9UKJ8 722 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 FBXL3Q9UKT7 428 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 SIGLEC7Q9Y286 467 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 NF1P21359 2839 aa11.27□□□□□ -0.61
CNOT1-220ENST00000569916 FAM171A2A8MVW0 826 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 B9A039 149 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 LY6G6DO95868 133 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 SERPINA5P05154 406 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 FABP3P05413 133 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 HEXAP06865 529 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 CD14P08571 375 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 MMP7P09237 267 aaPredicted RBP11.26□□□□□ -0.61
CNOT1-220ENST00000569916 T-ENOLP0DO92 83 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 BMP4P12644 408 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 ATP6V1B2P21281 511 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 CALB2P22676 271 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 NR4A1P22736 598 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 CDAP32320 146 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 FXYD6P3P58550 94 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 ERVK-25P63136 954 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 MRPS34P82930 218 aaKnown RBP11.26□□□□□ -0.61
CNOT1-220ENST00000569916 SPIBQ01892 262 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 DAG1Q14118 895 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 RAB35Q15286 201 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 MSMPQ1L6U9 139 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 CLEC9AQ6UXN8 241 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 RINLQ6ZS11 566 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 Q71RC1 249 aaPredicted RBP11.26□□□□□ -0.61
CNOT1-220ENST00000569916 SLC16A14Q7RTX9 510 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 FAM122BQ7Z309 247 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 DPPA2Q7Z7J5 298 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 ARIH2OSQ8N7S6 290 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 OR52J3Q8NH60 311 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 NSMAFQ92636 917 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 SORCS2Q96PQ0 1159 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 PLK3Q9H4B4 646 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 ACTR3BQ9P1U1 418 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 ADAM18Q9Y3Q7 739 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 PMF1-BGLAPU3KQ54 211 aa11.26□□□□□ -0.61
CNOT1-220ENST00000569916 SH3PXD2BA1X283 911 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 A6NIZ1 184 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 RNF223E7ERA6 249 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 GPRIN2O60269 458 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 PTP4A3O75365 173 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 GADD45GO95257 159 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 NPR2P20594 1047 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 RPL4P36578 427 aaKnown RBP11.25□□□□□ -0.61
CNOT1-220ENST00000569916 EFNA4P52798 201 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 RAP1BP61224 184 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 RAP1AP62834 184 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 SLC36A2Q495M3 483 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 MESTQ5EB52 335 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 THEM4Q5T1C6 240 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 TMEM53Q6P2H8 277 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 CYP2R1Q6VVX0 501 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 ARHGAP24Q8N264 748 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 LRRC18Q8N456 261 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 ZNF525Q8N782 197 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 FNDC8Q8TC99 324 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 MCUR1Q96AQ8 359 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 RSRC1Q96IZ7 334 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms