RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 OR4Q3Q8NH05 313 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 RNASE6Q93091 150 aaKnown RBP14.13□□□□□ -0.15
USB1-215ENST00000569252 KISS1RQ969F8 398 aaPredicted RBP14.13□□□□□ -0.15
USB1-215ENST00000569252 MCHR2Q969V1 340 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 GABARAPL3Q9BY60 117 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 MRPL13Q9BYD1 178 aaKnown RBP14.13□□□□□ -0.15
USB1-215ENST00000569252 RASSF4Q9H2L5 321 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 TOR3AQ9H497 397 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 GPR35Q9HC97 309 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 TAS2R16Q9NYV7 291 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 H2AFY2Q9P0M6 372 aaPredicted RBP14.13□□□□□ -0.15
USB1-215ENST00000569252 MALT1Q9UDY8 824 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 GPR52Q9Y2T5 361 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 MED12LQ86YW9 2145 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 DOCK7Q96N67 2140 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 C16orf97H3BN30 126 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 PEX19P40855 299 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 CDKN2AP42771 156 aaKnown RBP14.12□□□□□ -0.15
USB1-215ENST00000569252 RUNX1T1Q06455 604 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 MESTQ5EB52 335 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 SFRP5Q5T4F7 317 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 ACSM5Q6NUN0 579 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 CXorf67Q86X51 503 aaPredicted RBP14.12□□□□□ -0.15
USB1-215ENST00000569252 SDR9C7Q8NEX9 313 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 STEAP2Q8NFT2 490 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 NSMAFQ92636 917 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 ALKBH3Q96Q83 286 aaPredicted RBP14.12□□□□□ -0.15
USB1-215ENST00000569252 SNX18Q96RF0 628 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 KCNK17Q96T54 332 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 NMNAT3Q96T66 252 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 KCNN2Q9H2S1 579 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 SLC25A19Q9HC21 320 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 SRA1Q9HD15 236 aaKnown RBP14.12□□□□□ -0.15
USB1-215ENST00000569252 IMPAD1Q9NX62 359 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 NDRG3Q9UGV2 375 aa14.12□□□□□ -0.15
USB1-215ENST00000569252 SLC22A23A1A5C7 686 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 ZAR1LA6NP61 321 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 PRR23D1E9PI22 279 aaPredicted RBP14.11□□□□□ -0.15
USB1-215ENST00000569252 RPL36A-HNRNPH2H7BZ11 118 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 H7C1C5 153 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 DHHO43323 396 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 SLC16A7O60669 478 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 KHDRBS3O75525 346 aaKnown RBP14.11□□□□□ -0.15
USB1-215ENST00000569252 FARS2O95363 451 aaKnown RBP14.11□□□□□ -0.15
USB1-215ENST00000569252 SNAP29O95721 258 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 PRR23D2P0DMB1 279 aaPredicted RBP14.11□□□□□ -0.15
USB1-215ENST00000569252 PTDSS1P48651 473 aaKnown RBP14.11□□□□□ -0.15
USB1-215ENST00000569252 LCN6P62502 163 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 LGALS3BPQ08380 585 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 STK11Q15831 433 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 CEACAM16Q2WEN9 425 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 FBXL19-AS1Q494R0 122 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 C9orf135Q5VTT2 229 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 TTC23Q5W5X9 447 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 BHLHA15Q7RTS1 189 aaPredicted RBP14.11□□□□□ -0.15
USB1-215ENST00000569252 GABRG1Q8N1C3 465 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 DHRSXQ8N5I4 330 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 OR2T4Q8NH00 348 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 SYT4Q9H2B2 425 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 SEC61A2Q9H9S3 476 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 CMC2Q9NRP2 79 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 GALNT8Q9NY28 637 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 VSX1Q9NZR4 365 aaPredicted RBP14.11□□□□□ -0.15
USB1-215ENST00000569252 GMPPBQ9Y5P6 360 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 NAV3Q8IVL0 2385 aa14.11□□□□□ -0.15
USB1-215ENST00000569252 ZNF469Q96JG9 3925 aaPredicted RBP14.11□□□□□ -0.15
USB1-215ENST00000569252 LOC100130705A0A1B0GUX0 176 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 ZNF99A8MXY4 864 aaPredicted RBP14.1□□□□□ -0.15
USB1-215ENST00000569252 SURF4O15260 269 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 LYZL6O75951 148 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 NPR2P20594 1047 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 IGHV1-2P23083 117 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 EDNRAP25101 427 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 POLR2IP36954 125 aaKnown RBP14.1□□□□□ -0.15
USB1-215ENST00000569252 PCYT1AP49585 367 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 FAM27E3Q08E93 113 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 TESK1Q15569 626 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 SNCBQ16143 134 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 HIST3H3Q16695 136 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 SLX4IPQ5VYV7 408 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 LRFN4Q6PJG9 635 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 KLHL24Q6TFL4 600 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 PTCHD4Q6ZW05 846 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 DEPDC4Q8N2C3 294 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 SLC37A3Q8NCC5 494 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 TRUB1Q8WWH5 349 aaKnown RBP14.1□□□□□ -0.15
USB1-215ENST00000569252 CYGBQ8WWM9 190 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 MUCL1Q96DR8 90 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 APOL4Q9BPW4 351 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 GRIP2Q9C0E4 1043 aa14.1□□□□□ -0.15
USB1-215ENST00000569252 RPRD1BQ9NQG5 326 aaKnown RBP14.1□□□□□ -0.15
USB1-215ENST00000569252 A0A1W2PPL8 197 aa14.09□□□□□ -0.15
USB1-215ENST00000569252 TLX2O43763 284 aaPredicted RBP14.09□□□□□ -0.15
USB1-215ENST00000569252 HLA-DQA2P01906 255 aa14.09□□□□□ -0.15
USB1-215ENST00000569252 PPP3CBP16298 524 aa14.09□□□□□ -0.15
USB1-215ENST00000569252 PSMB1P20618 241 aaKnown RBP14.09□□□□□ -0.15
USB1-215ENST00000569252 UGT2B10P36537 528 aa14.09□□□□□ -0.15
USB1-215ENST00000569252 VHLP40337 213 aa14.09□□□□□ -0.15
USB1-215ENST00000569252 BLVRAP53004 296 aa14.09□□□□□ -0.15
USB1-215ENST00000569252 UBE2NP61088 152 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms