RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 SLC2A7Q6PXP3 512 aa13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 LINC00114Q6XXX2 140 aa13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 HDDC2Q7Z4H3 204 aa13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 COMTD1Q86VU5 262 aa13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 ARMC8Q8IUR7 673 aa13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 WDFY1Q8IWB7 410 aa13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 PAQR4Q8N4S7 273 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 RBM15BQ8NDT2 890 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 OR9I1Q8NGQ6 314 aa13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 ST7LQ8TDW4 575 aa13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 DVL3Q92997 716 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 POP5Q969H6 163 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 TSPAN32Q96QS1 320 aa13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 SH3GL3Q99963 347 aa13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 RSPO3Q9BXY4 272 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 EGLN1Q9GZT9 426 aa13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 KCNN2Q9H2S1 579 aa13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 SLCO1B3Q9NPD5 702 aa13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 NANSQ9NR45 359 aa13.39□□□□□ -0.27
HERPUD1-215ENST00000568676 PLSCR5A0PG75 271 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 LRRN3E7EW58 273 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 RNF13O43567 381 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 IGHG1P01857 330 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 ADH4P08319 380 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 PGA4P0DJD7 388 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 PGA3P0DJD8 388 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 PRTN3P24158 256 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 GCH1P30793 250 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 APLNRP35414 380 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 STX1BP61266 288 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 SCARB2Q14108 478 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 ZNF74Q16587 644 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 ZNF718Q3SXZ3 478 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 ZMAT1Q5H9K5 638 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 DOK3Q7L591 496 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 SYT14Q8NB59 555 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 HIPK4Q8NE63 616 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 OR4K5Q8NGD3 323 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 OR1J1Q8NGS3 322 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 DIRC2Q96SL1 478 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 SLC19A3Q9BZV2 496 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 CENPHQ9H3R5 247 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 TAS2R5Q9NYW4 299 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 SLC25A37Q9NYZ2 338 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 OPN4Q9UHM6 478 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 ZNF229Q9UJW7 825 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 TRIM33Q9UPN9 1127 aa13.38□□□□□ -0.27
HERPUD1-215ENST00000568676 POM121CA8CG34 1229 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 EVPLLA8MZ36 301 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 H3BSA7 217 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 TPST2O60704 377 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 HIST1H2ABP04908 130 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 QDPRP09417 244 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 CCL2P13500 99 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 GPX2P18283 190 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 ATP4BP51164 291 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 SLC18A1P54219 525 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 ERVS71-1P61550 626 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 HIST3H3Q16695 136 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 TSTQ16762 297 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 CEP85LQ5SZL2 805 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 TTC33Q6PID6 262 aaPredicted RBP13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 HIST3H2AQ7L7L0 130 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 LRRC17Q8N6Y2 441 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 ANKRD42Q8N9B4 389 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 CCL17Q92583 94 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 HIST1H2ACQ93077 130 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 MPP4Q96JB8 637 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 OR52B2Q96RD2 323 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 MCHR1Q99705 422 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 OR51B6Q9H340 312 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 STX18Q9P2W9 335 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 EIF3KQ9UBQ5 218 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 ANGPT4Q9Y264 503 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 PPIAL4AQ9Y536 164 aa13.37□□□□□ -0.27
HERPUD1-215ENST00000568676 MMP15P51511 669 aa13.36□□□□□ -0.27
HERPUD1-215ENST00000568676 WDR4P57081 412 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-215ENST00000568676 CLRN1P58418 232 aa13.36□□□□□ -0.27
HERPUD1-215ENST00000568676 IL13RA1P78552 427 aa13.36□□□□□ -0.27
HERPUD1-215ENST00000568676 HSF2Q03933 536 aa13.36□□□□□ -0.27
HERPUD1-215ENST00000568676 PDLIM3Q53GG5 364 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-215ENST00000568676 MBNL2Q5VZF2 373 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-215ENST00000568676 ICA1LQ8NDH6 482 aa13.36□□□□□ -0.27
HERPUD1-215ENST00000568676 MCHR2Q969V1 340 aa13.36□□□□□ -0.27
HERPUD1-215ENST00000568676 SEPHS2Q99611 448 aa13.36□□□□□ -0.27
HERPUD1-215ENST00000568676 PLEK2Q9NYT0 353 aa13.36□□□□□ -0.27
HERPUD1-215ENST00000568676 NUP50Q9UKX7 468 aa13.36□□□□□ -0.27
HERPUD1-215ENST00000568676 ZDHHC8Q9ULC8 765 aa13.36□□□□□ -0.27
HERPUD1-215ENST00000568676 POLR3KQ9Y2Y1 108 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-215ENST00000568676 TMEM120BA0PK00 339 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 ISPDA4D126 451 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 UBOX5O94941 541 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 CH25HO95992 272 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 IGHV1-46P01743 117 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 MMP7P09237 267 aaPredicted RBP13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 ASAH2BP0C7U1 165 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 NR2C1P13056 603 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 STOMP27105 288 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 ZNF133P52736 654 aaPredicted RBP13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 LCN2P80188 198 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms