RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 TRAM2Q15035 370 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 TAF11Q15544 211 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 FXNQ16595 210 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 ANKDD1AQ495B1 522 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 SLC36A2Q495M3 483 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 C10orf128Q5T292 105 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 C6orf52Q5T4I8 152 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 GKAP1Q5VSY0 366 aaPredicted RBP4.13□□□□□ -1.75
CLK3-219ENST00000567805 C8orf82Q6P1X6 216 aaPredicted RBP4.13□□□□□ -1.75
CLK3-219ENST00000567805 TMEM53Q6P2H8 277 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 LRFN4Q6PJG9 635 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 HACD2Q6Y1H2 254 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 CBLL1Q75N03 491 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 SPATA21Q7Z572 469 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 VTCN1Q7Z7D3 282 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 PRIMA1Q86XR5 153 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 HIPK1Q86Z02 1210 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 ZNF584Q8IVC4 421 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 SKA3Q8IX90 412 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 SLC15A3Q8IY34 581 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 RNF113BQ8IZP6 322 aaKnown RBP4.13□□□□□ -1.75
CLK3-219ENST00000567805 OFCC1Q8IZS5 231 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 SVOPLQ8N434 492 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 ANKS4BQ8N8V4 417 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 SYT14Q8NB59 555 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 ZNF540Q8NDQ6 660 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 NOXO1Q8NFA2 376 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 OR4K5Q8NGD3 323 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 NEU4Q8WWR8 484 aaPredicted RBP4.13□□□□□ -1.75
CLK3-219ENST00000567805 GEMIN6Q8WXD5 167 aaKnown RBP4.13□□□□□ -1.75
CLK3-219ENST00000567805 ASB10Q8WXI3 467 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 MCHR2Q969V1 340 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 MRPL24Q96A35 216 aaKnown RBP4.13□□□□□ -1.75
CLK3-219ENST00000567805 BPIFA2Q96DR5 249 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 CMTM5Q96DZ9 223 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 ZNF347Q96SE7 839 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 SEPHS2Q99611 448 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 DOK1Q99704 481 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 SH3GL3Q99963 347 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 MRPL13Q9BYD1 178 aaKnown RBP4.13□□□□□ -1.75
CLK3-219ENST00000567805 C1orf198Q9H425 327 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 SMURF2Q9HAU4 748 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 DYNLRB1Q9NP97 96 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 YAE1D1Q9NRH1 226 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 INIPQ9NRY2 104 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 C20orf141Q9NUB4 165 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 CMTM6Q9NX76 183 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 SLC7A8Q9UHI5 535 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 A4GNTQ9UNA3 340 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 HIF3AQ9Y2N7 669 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 TANC2Q9HCD6 1990 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 MXRA5Q9NR99 2828 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 CSPG4Q6UVK1 2322 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 MALRD1Q5VYJ5 2156 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 IQCMA0A1B0GVH7 501 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 KIAA1324LA8MWY0 1029 aaPredicted RBP4.12□□□□□ -1.75
CLK3-219ENST00000567805 M0R233 179 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 GSTA4O15217 222 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 PIP5K1CO60331 668 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 TRMUO75648 421 aaKnown RBP4.12□□□□□ -1.75
CLK3-219ENST00000567805 PRSS23O95084 383 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 SNAP29O95721 258 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 ZNF682O95780 498 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 SERPINA1P01009 418 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 IGHMP01871 453 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 ADRA2AP08913 450 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 PATE4P0C8F1 98 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 IGHV4-31P0DP07 118 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 SAGP10523 405 aaPredicted RBP4.12□□□□□ -1.75
CLK3-219ENST00000567805 IFI30P13284 250 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 DAOP14920 347 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 GIFP27352 417 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 PRDX6P30041 224 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 SLC9A3P48764 834 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 GSK3BP49841 420 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 GZMKP49863 264 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 RPL27P61353 136 aaKnown RBP4.12□□□□□ -1.75
CLK3-219ENST00000567805 MRPS34P82930 218 aaKnown RBP4.12□□□□□ -1.75
CLK3-219ENST00000567805 MYBPC1Q00872 1141 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 PLP2Q04941 152 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 PRKCDQ05655 676 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 CD47Q08722 323 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 GGTLC2Q14390 218 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 RAB39AQ14964 217 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 CARTPTQ16568 116 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 TBC1D28Q2M2D7 210 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 CHRFAM7AQ494W8 412 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 IFI44LQ53G44 452 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 ALG10Q5BKT4 473 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 THEM4Q5T1C6 240 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 ARMC4Q5T2S8 1044 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 FAM205BPQ63HN1 556 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 CYB5R2Q6BCY4 276 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 ZNF730Q6ZMV8 503 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 FKBP9P1Q75LS8 142 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 SLC16A14Q7RTX9 510 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 OAFQ86UD1 273 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 CYP4Z1Q86W10 505 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 TREML1Q86YW5 311 aa4.12□□□□□ -1.75
CLK3-219ENST00000567805 CDK20Q8IZL9 346 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms