RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 FZR1Q9UM11 496 aa14.19□□□□□ -0.14
TSR3-202ENST00000566296 ELOVL7A1L3X0 281 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 C11orf98E9PRG8 122 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 PLPP3O14495 311 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 PPIHO43447 177 aaKnown RBP14.18□□□□□ -0.14
TSR3-202ENST00000566296 MSMBP08118 114 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 HSD17B1P14061 328 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 AQP1P29972 269 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 BIDP55957 195 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 SELENOVP59797 346 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 MRPS11P82912 194 aaKnown RBP14.18□□□□□ -0.14
TSR3-202ENST00000566296 RAB39AQ14964 217 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 FXNQ16595 210 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 NKPD1Q17RQ9 610 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 RGS7BPQ6MZT1 257 aaPredicted RBP14.18□□□□□ -0.14
TSR3-202ENST00000566296 DEF8Q6ZN54 512 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 MICU2Q8IYU8 434 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 TEX29Q8N6K0 151 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 SNX33Q8WV41 574 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 ZFAND2BQ8WV99 257 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 KCTD14Q9BQ13 255 aaPredicted RBP14.18□□□□□ -0.14
TSR3-202ENST00000566296 LRMDAQ9H2I8 198 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 ZNF275Q9NSD4 429 aaPredicted RBP14.18□□□□□ -0.14
TSR3-202ENST00000566296 MYEF2Q9P2K5 600 aaKnown RBP14.18□□□□□ -0.14
TSR3-202ENST00000566296 GPR160Q9UJ42 338 aa14.18□□□□□ -0.14
TSR3-202ENST00000566296 WNK2Q9Y3S1 2297 aa14.17□□□□□ -0.14
TSR3-202ENST00000566296 SLC22A23A1A5C7 686 aa14.17□□□□□ -0.14
TSR3-202ENST00000566296 FAM157AC9JC47 383 aa14.17□□□□□ -0.14
TSR3-202ENST00000566296 LRRN3E7EW58 273 aa14.17□□□□□ -0.14
TSR3-202ENST00000566296 DNAJC8O75937 253 aaPredicted RBP14.17□□□□□ -0.14
TSR3-202ENST00000566296 FARS2O95363 451 aaKnown RBP14.17□□□□□ -0.14
TSR3-202ENST00000566296 COL8A2P25067 703 aa14.17□□□□□ -0.14
TSR3-202ENST00000566296 CDH12P55289 794 aa14.17□□□□□ -0.14
TSR3-202ENST00000566296 TMEM33P57088 247 aa14.17□□□□□ -0.14
TSR3-202ENST00000566296 PIWIL3Q7Z3Z3 882 aaKnown RBP14.17□□□□□ -0.14
TSR3-202ENST00000566296 LRP11Q86VZ4 500 aa14.17□□□□□ -0.14
TSR3-202ENST00000566296 CARM1Q86X55 608 aa14.17□□□□□ -0.14
TSR3-202ENST00000566296 ZNF418Q8TF45 676 aaPredicted RBP14.17□□□□□ -0.14
TSR3-202ENST00000566296 YIPF5Q969M3 257 aa14.17□□□□□ -0.14
TSR3-202ENST00000566296 RSPO3Q9BXY4 272 aaPredicted RBP14.17□□□□□ -0.14
TSR3-202ENST00000566296 CDH20Q9HBT6 801 aa14.17□□□□□ -0.14
TSR3-202ENST00000566296 CD300AQ9UGN4 299 aa14.17□□□□□ -0.14
TSR3-202ENST00000566296 GSTA4O15217 222 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 GSC2O15499 205 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 CHP2O43745 196 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 FMO6PO60774 539 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 NCR1O76036 304 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 VENTXO95231 258 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 SERPINA5P05154 406 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 OR8G3PP0DMU2 310 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 GAAP10253 952 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 NAT2P11245 290 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 PCBP3P57721 371 aaKnown RBP14.16□□□□□ -0.14
TSR3-202ENST00000566296 ACTG1P63261 375 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 ZSCAN26Q16670 478 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 TMEM53Q6P2H8 277 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 ZNF613Q6PF04 617 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 DPPA2Q7Z7J5 298 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 PATL1Q86TB9 770 aaKnown RBP14.16□□□□□ -0.14
TSR3-202ENST00000566296 WDFY1Q8IWB7 410 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 RNF148Q8N7C7 305 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 SLC30A7Q8NEW0 376 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 SEMA6DQ8NFY4 1073 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 OR6X1Q8NH79 312 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 TMEM54Q969K7 222 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 MCHR1Q99705 422 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 THTPAQ9BU02 230 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 RACGAP1Q9H0H5 632 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 MMADHCQ9H3L0 296 aaPredicted RBP14.16□□□□□ -0.14
TSR3-202ENST00000566296 C1orf198Q9H425 327 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 TREM2Q9NZC2 230 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 GLTPQ9NZD2 209 aa14.16□□□□□ -0.14
TSR3-202ENST00000566296 DYSFO75923 2080 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 TRAV20A0A0B4J274 112 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 M0R3H8 397 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 TPST2O60704 377 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 GMNNO75496 209 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 PATE4P0C8F1 98 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 FAM157BP0CG42 384 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 RUNX1T1Q06455 604 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 ALKBH6Q3KRA9 238 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 TMEM154Q6P9G4 183 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 NHLRC1Q6VVB1 395 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 SLC35D2Q76EJ3 337 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 CCDC80Q76M96 950 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 ZNF584Q8IVC4 421 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 SKA3Q8IX90 412 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 SLC22A24Q8N4F4 322 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 SMYD1Q8NB12 490 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 ZNF566Q969W8 418 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 MCUR1Q96AQ8 359 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 RNF121Q9H920 327 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 TMEM38BQ9NVV0 291 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 TAAR3PQ9P1P4 343 aa14.15□□□□□ -0.14
TSR3-202ENST00000566296 CXCR6O00574 342 aa14.14□□□□□ -0.15
TSR3-202ENST00000566296 RNF13O43567 381 aa14.14□□□□□ -0.15
TSR3-202ENST00000566296 RP2O75695 350 aa14.14□□□□□ -0.15
TSR3-202ENST00000566296 MFN2O95140 757 aa14.14□□□□□ -0.15
TSR3-202ENST00000566296 PTHP01270 115 aa14.14□□□□□ -0.15
TSR3-202ENST00000566296 IFNA14P01570 189 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms