RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 RHNO1Q9BSD3 238 aa16.46■□□□□ 0.23
TRADD-203ENST00000563348 NDE1Q9NXR1 346 aa16.46■□□□□ 0.23
TRADD-203ENST00000563348 ZNF346Q9UL40 294 aaKnown RBP16.46■□□□□ 0.23
TRADD-203ENST00000563348 JMJD1CQ15652 2540 aa16.46■□□□□ 0.22
TRADD-203ENST00000563348 SONP18583 2426 aaKnown RBP16.45■□□□□ 0.22
TRADD-203ENST00000563348 TRAV27A0A087WT01 109 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 IGHMP01871 453 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 SERPINA5P05154 406 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 NR4A1P22736 598 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 MSX2P35548 267 aaPredicted RBP16.45■□□□□ 0.22
TRADD-203ENST00000563348 MNAT1P51948 309 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 DSCR9P59020 149 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 RPL27P61353 136 aaKnown RBP16.45■□□□□ 0.22
TRADD-203ENST00000563348 DAG1Q14118 895 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 RAB39AQ14964 217 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 SPATS1Q496A3 300 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 IQCCQ4KMZ1 466 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 PODNL1Q6PEZ8 512 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 C16orf89Q6UX73 402 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 FITM2Q8N6M3 262 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 OR10H5Q8NGA6 315 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 OR4K5Q8NGD3 323 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 PYURFQ96I23 114 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 KCNK17Q96T54 332 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 ALG12Q9BV10 488 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 PLK3Q9H4B4 646 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 SMURF2Q9HAU4 748 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 MAGEL2Q9UJ55 1249 aa16.45■□□□□ 0.22
TRADD-203ENST00000563348 CDC42EP2O14613 210 aa16.44■□□□□ 0.22
TRADD-203ENST00000563348 F12P00748 615 aaPredicted RBP16.44■□□□□ 0.22
TRADD-203ENST00000563348 NR2C1P13056 603 aa16.44■□□□□ 0.22
TRADD-203ENST00000563348 HOXB4P17483 251 aaPredicted RBP16.44■□□□□ 0.22
TRADD-203ENST00000563348 NPR2P20594 1047 aa16.44■□□□□ 0.22
TRADD-203ENST00000563348 VLDLRP98155 873 aa16.44■□□□□ 0.22
TRADD-203ENST00000563348 TOP3AQ13472 1001 aaPredicted RBP16.44■□□□□ 0.22
TRADD-203ENST00000563348 SLC25A47Q6Q0C1 308 aa16.44■□□□□ 0.22
TRADD-203ENST00000563348 SLC16A14Q7RTX9 510 aa16.44■□□□□ 0.22
TRADD-203ENST00000563348 ZNF584Q8IVC4 421 aa16.44■□□□□ 0.22
TRADD-203ENST00000563348 DEFB107AQ8IZN7 70 aa16.44■□□□□ 0.22
TRADD-203ENST00000563348 OR13C2Q8NGS9 318 aa16.44■□□□□ 0.22
TRADD-203ENST00000563348 RBP7Q96R05 134 aa16.44■□□□□ 0.22
TRADD-203ENST00000563348 DOK1Q99704 481 aa16.44■□□□□ 0.22
TRADD-203ENST00000563348 SIAEQ9HAT2 523 aa16.44■□□□□ 0.22
TRADD-203ENST00000563348 FBXO9Q9UK97 447 aaPredicted RBP16.44■□□□□ 0.22
TRADD-203ENST00000563348 TMEM5Q9Y2B1 443 aa16.44■□□□□ 0.22
TRADD-203ENST00000563348 SPEF1Q9Y4P9 236 aa16.44■□□□□ 0.22
TRADD-203ENST00000563348 TMEM129A0AVI4 362 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 hCG_2039718K7EN88 272 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 SLC2A10O95528 541 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 FAM107AO95990 144 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 ITGA2P17301 1181 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 GPR4P46093 362 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 MRPS34P82930 218 aaKnown RBP16.43■□□□□ 0.22
TRADD-203ENST00000563348 MXRA7P84157 204 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 SNTB2Q13425 540 aaKnown RBP16.43■□□□□ 0.22
TRADD-203ENST00000563348 SLC36A2Q495M3 483 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 ZBED5Q49AG3 693 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 THEM4Q5T1C6 240 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 GKAP1Q5VSY0 366 aaPredicted RBP16.43■□□□□ 0.22
TRADD-203ENST00000563348 FAM205BPQ63HN1 556 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 KRT80Q6KB66 452 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 TMEM53Q6P2H8 277 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 CLEC2AQ6UVW9 174 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 IGFN1Q86VF2 1251 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 ZNF519Q8TB69 540 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 FNDC8Q8TC99 324 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 POM121Q96HA1 1249 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 NSL1Q96IY1 281 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 DHRS1Q96LJ7 313 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 NSMCE2Q96MF7 247 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 RNF121Q9H920 327 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 CMAHPQ9Y471 501 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 UGT2A1Q9Y4X1 527 aa16.43■□□□□ 0.22
TRADD-203ENST00000563348 IGHV4-30-2A0A087WSY4 118 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 IGKV1D-43A0A0B4J1Z2 117 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 TRBV4-1A0A0J9YWV2 114 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 A6NIZ1 184 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 ARPC2O15144 300 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 PTP4A3O75365 173 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 DIRAS1O95057 198 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 SEMG1P04279 462 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 GLRXP35754 106 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 RAP1BP61224 184 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 RAP1AP62834 184 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 CD47Q08722 323 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 FGD3Q5JSP0 725 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 ZNF525Q8N782 197 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 ARIH2OSQ8N7S6 290 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 MAPK1IP1LQ8NDC0 245 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 FAM46AQ96IP4 442 aaKnown RBP16.42■□□□□ 0.22
TRADD-203ENST00000563348 SORCS2Q96PQ0 1159 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 TSPAN32Q96QS1 320 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 V9GYQ6 96 aa16.42■□□□□ 0.22
TRADD-203ENST00000563348 B2RBV5 119 aa16.41■□□□□ 0.22
TRADD-203ENST00000563348 CD14P08571 375 aa16.41■□□□□ 0.22
TRADD-203ENST00000563348 MMP7P09237 267 aaPredicted RBP16.41■□□□□ 0.22
TRADD-203ENST00000563348 ZNF26P17031 533 aaPredicted RBP16.41■□□□□ 0.22
TRADD-203ENST00000563348 CDAP32320 146 aa16.41■□□□□ 0.22
TRADD-203ENST00000563348 RPL4P36578 427 aaKnown RBP16.41■□□□□ 0.22
TRADD-203ENST00000563348 OMPP47874 163 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms