RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 FAM205BPQ63HN1 556 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 PGBD2Q6P3X8 592 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 MED13LQ71F56 2210 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 LRRC75A-AS1Q8N1F1 130 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 CANT1Q8WVQ1 401 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 NABP1Q96AH0 204 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 DHRS9Q9BPW9 319 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 TRAF4Q9BUZ4 470 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 GSX2Q9BZM3 304 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 TRIM15Q9C019 465 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 GRIP2Q9C0E4 1043 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 TMCC3Q9ULS5 477 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 AURKCQ9UQB9 309 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 POMPQ9Y244 141 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 TCRBV3S1A0A5B6 114 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 A6NIZ1 184 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 TNFRSF11BO00300 401 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 OR10H3O60404 316 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 SMPD2O60906 423 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 TXNDC12O95881 172 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 OR8G3PP0DMU2 310 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 RAP2AP10114 183 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 ZNF14P17017 642 aaPredicted RBP13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 TTKP33981 857 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 RPL4P36578 427 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 RAP1BP61224 184 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 RAP1AP62834 184 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 ADAM8P78325 824 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 MRPS34P82930 218 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 PIGFQ07326 219 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 PPP1R8Q12972 351 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 GSG1Q2KHT4 349 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 MESTQ5EB52 335 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 THEM4Q5T1C6 240 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 OR2T5Q6IEZ7 315 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 C11orf71Q6IPW1 123 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 FOXL2NBQ6ZUU3 175 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 OR9Q2Q8NGE9 314 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 OR2T29Q8NH02 315 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 TMEM171Q8WVE6 324 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 MS4A3Q96HJ5 214 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 LRGUKQ96M69 825 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 SH3GL3Q99963 347 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 CHID1Q9BWS9 393 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 DENND2DQ9H6A0 471 aaPredicted RBP13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 KRCC1Q9NPI7 259 aaPredicted RBP13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 IL20RAQ9UHF4 553 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 SLC7A8Q9UHI5 535 aa13.25□□□□□ -0.29
SNRPA1-213ENST00000560856 IGHV2OR16-5A0A0B4J2B6 119 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 SLC22A23A1A5C7 686 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 H7C1C5 153 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 IMPA2O14732 288 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 ARHGEF9O43307 516 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 CD79AP11912 226 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 CDAP32320 146 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 CAPZA2P47755 286 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 GIPRP48546 466 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 PTH2RP49190 550 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 ZNF84P51523 738 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 LCN6P62502 163 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 RAB1AP62820 205 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 NKX6-1P78426 367 aaPredicted RBP13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 CD47Q08722 323 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 TSPAN31Q12999 210 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 RFX4Q33E94 735 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 GPR139Q6DWJ6 353 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 ZNF544Q6NX49 715 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 SMARCD3Q6STE5 483 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 DPY19L2P2Q6ZN68 376 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 ZNF584Q8IVC4 421 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 DEPDC4Q8N2C3 294 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 FNDC8Q8TC99 324 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 GNPDA2Q8TDQ7 276 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 RASD2Q96D21 266 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 RBP7Q96R05 134 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 OR52D1Q9H346 318 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 SIAEQ9HAT2 523 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 GRHPRQ9UBQ7 328 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 IER3IP1Q9Y5U9 82 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 ATP23Q9Y6H3 246 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 ARFGEF3Q5TH69 2177 aa13.24□□□□□ -0.29
SNRPA1-213ENST00000560856 TEX13CA0A0J9YWL9 993 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 DHRS12A0PJE2 317 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 PRSS37A4D1T9 235 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 AHCYL1O43865 530 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 MGRN1O60291 552 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 ATP5HO75947 161 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 UBL3O95164 117 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 GASTP01350 101 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 CRYAAP02489 173 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 SCG5P05408 212 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 MMP7P09237 267 aaPredicted RBP13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 ZNF35P13682 527 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 APEHP13798 732 aaKnown RBP13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 SDHAP31040 664 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 IFNGR2P38484 337 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 NPRL3Q12980 569 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 FLOT2Q14254 428 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 RAB39AQ14964 217 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 ETFDHQ16134 617 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms