RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 ZNF627Q7L945 461 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 NPEPL1Q8NDH3 523 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 OR52E2Q8NGJ4 325 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 OR52N5Q8NH56 324 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 DDOQ99489 341 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 RBM4BQ9BQ04 359 aaKnown RBP19.07■□□□□ 0.64
SNX1-210ENST00000560260 RBM4Q9BWF3 364 aaKnown RBP19.07■□□□□ 0.64
SNX1-210ENST00000560260 SLC25A19Q9HC21 320 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 OR6C68A6NDL8 312 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 DCTN6O00399 190 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 SIAH2O43255 324 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 COX6B1P14854 86 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 PPP3CBP16298 524 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 NOS3P29474 1203 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 POLR2IP36954 125 aaKnown RBP19.06■□□□□ 0.64
SNX1-210ENST00000560260 PEX19P40855 299 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 TUBA1BP68363 451 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 TUBA4AP68366 448 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 TGFBR3Q03167 851 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 TIMM23BQ5SRD1 257 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 THEM4Q5T1C6 240 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 ZNF787Q6DD87 383 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 OR7E24Q6IFN5 339 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 SLC27A4Q6P1M0 643 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 ANKRD16Q6P6B7 361 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 ZNF813Q6ZN06 617 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 TUBA1AQ71U36 451 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 JAZF1Q86VZ6 243 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 C17orf78Q8N4C9 275 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 CYB561A3Q8NBI2 242 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 DACH2Q96NX9 599 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 TSSK2Q96PF2 358 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 SNX18Q96RF0 628 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 TMEM38BQ9NVV0 291 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 NKX1-2Q9UD57 310 aaPredicted RBP19.06■□□□□ 0.64
SNX1-210ENST00000560260 NDRG3Q9UGV2 375 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 BAIAP2Q9UQB8 552 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 SLC25A15Q9Y619 301 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 PKDREJQ9NTG1 2253 aa19.06■□□□□ 0.64
SNX1-210ENST00000560260 RRP9O43818 475 aaKnown RBP19.05■□□□□ 0.64
SNX1-210ENST00000560260 AHCYL1O43865 530 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 CDAP32320 146 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 GIPRP48546 466 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 ALDH3A2P51648 485 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 CRMP1Q14194 572 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 FOXL2NBQ6ZUU3 175 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 WFDC8Q8IUA0 241 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 SLC37A3Q8NCC5 494 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 FNDC8Q8TC99 324 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 FAM222BQ8WU58 562 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 NABP1Q96AH0 204 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 FOXN4Q96NZ1 517 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 RBP7Q96R05 134 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 C9orf16Q9BUW7 83 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 GABARAPL3Q9BY60 117 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 NUAK2Q9H093 628 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 ZNF224Q9NZL3 707 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 NPAP1Q9NZP6 1156 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 NBPF19A0A087WUL8 3843 aa19.05■□□□□ 0.64
SNX1-210ENST00000560260 CRYBG3Q68DQ2 2970 aa19.04■□□□□ 0.64
SNX1-210ENST00000560260 IGLV1-36A0A0B4J1U3 117 aa19.04■□□□□ 0.64
SNX1-210ENST00000560260 EPXP11678 715 aa19.04■□□□□ 0.64
SNX1-210ENST00000560260 NR2C1P13056 603 aa19.04■□□□□ 0.64
SNX1-210ENST00000560260 PEX2P28328 305 aa19.04■□□□□ 0.64
SNX1-210ENST00000560260 ESRRGP62508 458 aa19.04■□□□□ 0.64
SNX1-210ENST00000560260 TRIP10Q15642 601 aa19.04■□□□□ 0.64
SNX1-210ENST00000560260 LPCAT4Q643R3 524 aa19.04■□□□□ 0.64
SNX1-210ENST00000560260 ALKBH2Q6NS38 261 aa19.04■□□□□ 0.64
SNX1-210ENST00000560260 FGFBP3Q8TAT2 258 aa19.04■□□□□ 0.64
SNX1-210ENST00000560260 NOX3Q9HBY0 568 aa19.04■□□□□ 0.64
SNX1-210ENST00000560260 RPRD1BQ9NQG5 326 aaKnown RBP19.04■□□□□ 0.64
SNX1-210ENST00000560260 CMC2Q9NRP2 79 aa19.04■□□□□ 0.64
SNX1-210ENST00000560260 ARPC4-TTLL3A0A0A6YYG9 625 aa19.03■□□□□ 0.64
SNX1-210ENST00000560260 ZAR1LA6NP61 321 aa19.03■□□□□ 0.64
SNX1-210ENST00000560260 SLC16A7O60669 478 aa19.03■□□□□ 0.64
SNX1-210ENST00000560260 SCG5P05408 212 aa19.03■□□□□ 0.64
SNX1-210ENST00000560260 ZNF84P51523 738 aa19.03■□□□□ 0.64
SNX1-210ENST00000560260 PPA1Q15181 289 aa19.03■□□□□ 0.64
SNX1-210ENST00000560260 PTGES3Q15185 160 aaKnown RBP19.03■□□□□ 0.64
SNX1-210ENST00000560260 OTPQ5XKR4 325 aa19.03■□□□□ 0.64
SNX1-210ENST00000560260 ZNF295-AS1Q8N0V1 137 aa19.03■□□□□ 0.64
SNX1-210ENST00000560260 OR6V1Q8N148 313 aa19.03■□□□□ 0.64
SNX1-210ENST00000560260 HSD17B8Q92506 261 aa19.03■□□□□ 0.64
SNX1-210ENST00000560260 EME1Q96AY2 570 aa19.03■□□□□ 0.64
SNX1-210ENST00000560260 RIBC2Q9H4K1 309 aa19.03■□□□□ 0.64
SNX1-210ENST00000560260 KCNN3Q9UGI6 736 aa19.03■□□□□ 0.64
SNX1-210ENST00000560260 KLHL21Q9UJP4 597 aa19.03■□□□□ 0.64
SNX1-210ENST00000560260 DCHS2Q6V1P9 2916 aa19.03■□□□□ 0.64
SNX1-210ENST00000560260 M0R129 80 aa19.02■□□□□ 0.64
SNX1-210ENST00000560260 SURF4O15260 269 aa19.02■□□□□ 0.64
SNX1-210ENST00000560260 GPANK1O95872 356 aa19.02■□□□□ 0.64
SNX1-210ENST00000560260 RENP00797 406 aa19.02■□□□□ 0.64
SNX1-210ENST00000560260 CRYGSP22914 178 aa19.02■□□□□ 0.64
SNX1-210ENST00000560260 MRPS34P82930 218 aaKnown RBP19.02■□□□□ 0.64
SNX1-210ENST00000560260 ZBTB49Q6ZSB9 765 aa19.02■□□□□ 0.64
SNX1-210ENST00000560260 P2RY8Q86VZ1 359 aa19.02■□□□□ 0.64
SNX1-210ENST00000560260 SKA3Q8IX90 412 aa19.02■□□□□ 0.64
SNX1-210ENST00000560260 SLC22A24Q8N4F4 322 aa19.02■□□□□ 0.64
SNX1-210ENST00000560260 OR9Q1Q8NGQ5 310 aa19.02■□□□□ 0.64
SNX1-210ENST00000560260 ZNRF4Q8WWF5 429 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms