RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 SDHAP31040 664 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 CDAP32320 146 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 MAGEA2P43356 314 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 LIMS1P48059 325 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 GIPRP48546 466 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 RAB1AP62820 205 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 CLEC12AQ5QGZ9 265 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 THEM4Q5T1C6 240 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 AGAP6Q5VW22 663 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 RPL13AP3Q6NVV1 102 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 PGBD2Q6P3X8 592 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 DNM1P34Q6PK57 102 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 DPY19L2P2Q6ZN68 376 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 ZER1Q7Z7L7 766 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.83□□□□□ -1.16
SPG11-207ENST00000558138 ADGRG5Q8IZF4 528 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 ARIH2OSQ8N7S6 290 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 ZNF611Q8N823 705 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 ICA1LQ8NDH6 482 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 OR10G2Q8NGC3 310 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 CANT1Q8WVQ1 401 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 TRMT61AQ96FX7 289 aaKnown RBP7.83□□□□□ -1.16
SPG11-207ENST00000558138 SAMD8Q96LT4 415 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 TMEM204Q9BSN7 226 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 LRMDAQ9H2I8 198 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 OR52D1Q9H346 318 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 NELFAQ9H3P2 528 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 ZNF556Q9HAH1 456 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 CDH20Q9HBT6 801 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 FBXL3Q9UKT7 428 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 SIGLEC7Q9Y286 467 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 FBN2P35556 2912 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 ITPR2Q14571 2701 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 APCP25054 2843 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 E7EQL1 145 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 H3BN98 237 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 SLC16A7O60669 478 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 FKBP6O75344 327 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 PTHP01270 115 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 TSPAN19P0C672 248 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 PATE4P0C8F1 98 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 BMP4P12644 408 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 CCNOP22674 350 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 APLNRP35414 380 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 CDKN1AP38936 164 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 ATP5J2P56134 94 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 NKX6-1P78426 367 aaPredicted RBP7.82□□□□□ -1.16
SPG11-207ENST00000558138 NAAAQ02083 359 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 TSPAN31Q12999 210 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 RAB39AQ14964 217 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 MICAQ29983 383 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 TBC1D28Q2M2D7 210 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 RFX4Q33E94 735 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 IQCCQ4KMZ1 466 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 MESTQ5EB52 335 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 KRT80Q6KB66 452 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 C1orf94Q6P1W5 598 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 LEG1Q6P5S2 330 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 PGM2L1Q6PCE3 622 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 LRFN4Q6PJG9 635 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 SEZ6L2Q6UXD5 910 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 DPPA2Q7Z7J5 298 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 NAV2Q8IVL1 2488 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 SKA3Q8IX90 412 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 MUC15Q8N387 334 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 CLDN22Q8N7P3 220 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 LRRC75AQ8NAA5 344 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 ZNF519Q8TB69 540 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 GIPC3Q8TF64 312 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 FOXN4Q96NZ1 517 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 KCNK17Q96T54 332 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 FOXC2Q99958 501 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 DHRS9Q9BPW9 319 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 MRPL13Q9BYD1 178 aaKnown RBP7.82□□□□□ -1.16
SPG11-207ENST00000558138 OR51B6Q9H340 312 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 MMADHCQ9H3L0 296 aaPredicted RBP7.82□□□□□ -1.16
SPG11-207ENST00000558138 EGLN3Q9H6Z9 239 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 SMURF2Q9HAU4 748 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 PDP1Q9P0J1 537 aaPredicted RBP7.82□□□□□ -1.16
SPG11-207ENST00000558138 SLC7A8Q9UHI5 535 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 ABCA4P78363 2273 aa7.82□□□□□ -1.16
SPG11-207ENST00000558138 SLC22A23A1A5C7 686 aa7.81□□□□□ -1.16
SPG11-207ENST00000558138 PRSS37A4D1T9 235 aa7.81□□□□□ -1.16
SPG11-207ENST00000558138 ZNF503-AS2A6NEH8 195 aa7.81□□□□□ -1.16
SPG11-207ENST00000558138 PTP4A3O75365 173 aa7.81□□□□□ -1.16
SPG11-207ENST00000558138 KHDRBS3O75525 346 aaKnown RBP7.81□□□□□ -1.16
SPG11-207ENST00000558138 TIPRLO75663 272 aa7.81□□□□□ -1.16
SPG11-207ENST00000558138 SOX14O95416 240 aa7.81□□□□□ -1.16
SPG11-207ENST00000558138 GASTP01350 101 aa7.81□□□□□ -1.16
SPG11-207ENST00000558138 IGKV3-15P01624 115 aa7.81□□□□□ -1.16
SPG11-207ENST00000558138 HLA-DQA2P01906 255 aa7.81□□□□□ -1.16
SPG11-207ENST00000558138 GSTM3P21266 225 aa7.81□□□□□ -1.16
SPG11-207ENST00000558138 MSR1P21757 451 aa7.81□□□□□ -1.16
SPG11-207ENST00000558138 POU1F1P28069 291 aa7.81□□□□□ -1.16
SPG11-207ENST00000558138 GSSP48637 474 aa7.81□□□□□ -1.16
SPG11-207ENST00000558138 PTH2RP49190 550 aa7.81□□□□□ -1.16
SPG11-207ENST00000558138 PCBD1P61457 104 aa7.81□□□□□ -1.16
SPG11-207ENST00000558138 SNRPD2P62316 118 aaKnown RBP7.81□□□□□ -1.16
SPG11-207ENST00000558138 SNTB2Q13425 540 aaKnown RBP7.81□□□□□ -1.16
SPG11-207ENST00000558138 DAG1Q14118 895 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms