RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 SNAP29O95721 258 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 ZNF3P17036 446 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 CRMP1Q14194 572 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 GABRA6Q16445 453 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 C10orf128Q5T292 105 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 SLX4IPQ5VYV7 408 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 OR7E24Q6IFN5 339 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 PACRGLQ8N7B6 248 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 NPEPL1Q8NDH3 523 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 OR1K1Q8NGR3 316 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 OTULINQ96BN8 352 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 SLC38A2Q96QD8 506 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 SNX18Q96RF0 628 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 FOXB1Q99853 325 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 NUAK2Q9H093 628 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 FN3KQ9H479 309 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 TOR3AQ9H497 397 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 SRA1Q9HD15 236 aaKnown RBP18.68■□□□□ 0.58
CASC4-204ENST00000557945 RPRD1BQ9NQG5 326 aaKnown RBP18.68■□□□□ 0.58
CASC4-204ENST00000557945 OR6C68A6NDL8 312 aa18.67■□□□□ 0.58
CASC4-204ENST00000557945 CTLA4P16410 223 aa18.67■□□□□ 0.58
CASC4-204ENST00000557945 ZNF133P52736 654 aaPredicted RBP18.67■□□□□ 0.58
CASC4-204ENST00000557945 SNAPC1Q16533 368 aa18.67■□□□□ 0.58
CASC4-204ENST00000557945 ZNF362Q5T0B9 420 aaPredicted RBP18.67■□□□□ 0.58
CASC4-204ENST00000557945 ALKBH2Q6NS38 261 aa18.67■□□□□ 0.58
CASC4-204ENST00000557945 ANKRD16Q6P6B7 361 aa18.67■□□□□ 0.58
CASC4-204ENST00000557945 DNM1P34Q6PK57 102 aa18.67■□□□□ 0.58
CASC4-204ENST00000557945 ZNF813Q6ZN06 617 aa18.67■□□□□ 0.58
CASC4-204ENST00000557945 C1orf162Q8NEQ5 155 aaPredicted RBP18.67■□□□□ 0.58
CASC4-204ENST00000557945 MUS81Q96NY9 551 aa18.67■□□□□ 0.58
CASC4-204ENST00000557945 TSSK2Q96PF2 358 aa18.67■□□□□ 0.58
CASC4-204ENST00000557945 MBOAT4Q96T53 435 aa18.67■□□□□ 0.58
CASC4-204ENST00000557945 PRRG3Q9BZD7 231 aa18.67■□□□□ 0.58
CASC4-204ENST00000557945 VCXQ9H320 206 aa18.67■□□□□ 0.58
CASC4-204ENST00000557945 NDRG3Q9UGV2 375 aa18.67■□□□□ 0.58
CASC4-204ENST00000557945 HCFC1P51610 2035 aa18.67■□□□□ 0.58
CASC4-204ENST00000557945 SPTAN1Q13813 2472 aaKnown RBP18.66■□□□□ 0.58
CASC4-204ENST00000557945 A0A1W2PPL8 197 aa18.66■□□□□ 0.58
CASC4-204ENST00000557945 TUBAL3A6NHL2 446 aa18.66■□□□□ 0.58
CASC4-204ENST00000557945 SURF4O15260 269 aa18.66■□□□□ 0.58
CASC4-204ENST00000557945 KHDRBS3O75525 346 aaKnown RBP18.66■□□□□ 0.58
CASC4-204ENST00000557945 B4GALT1P15291 398 aa18.66■□□□□ 0.58
CASC4-204ENST00000557945 CRABP1P29762 137 aa18.66■□□□□ 0.58
CASC4-204ENST00000557945 HOXC12P31275 282 aa18.66■□□□□ 0.58
CASC4-204ENST00000557945 CDAP32320 146 aa18.66■□□□□ 0.58
CASC4-204ENST00000557945 CENPAP49450 140 aa18.66■□□□□ 0.58
CASC4-204ENST00000557945 ETFDHQ16134 617 aa18.66■□□□□ 0.58
CASC4-204ENST00000557945 HIKESHIQ53FT3 197 aa18.66■□□□□ 0.58
CASC4-204ENST00000557945 LINC01560Q8TB33 94 aa18.66■□□□□ 0.58
CASC4-204ENST00000557945 BCL2L2Q92843 193 aaPredicted RBP18.66■□□□□ 0.58
CASC4-204ENST00000557945 MED18Q9BUE0 208 aa18.66■□□□□ 0.58
CASC4-204ENST00000557945 SEC61A2Q9H9S3 476 aa18.66■□□□□ 0.58
CASC4-204ENST00000557945 SMPD3Q9NY59 655 aaPredicted RBP18.66■□□□□ 0.58
CASC4-204ENST00000557945 OR5H1A6NKK0 313 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 FAM183AA6NL82 134 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 PPP3CBP16298 524 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 PAICSP22234 425 aaKnown RBP18.65■□□□□ 0.58
CASC4-204ENST00000557945 PEX19P40855 299 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 GUCA1AP43080 201 aaPredicted RBP18.65■□□□□ 0.58
CASC4-204ENST00000557945 DBPQ10586 325 aaPredicted RBP18.65■□□□□ 0.58
CASC4-204ENST00000557945 TBRG1Q3YBR2 411 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 C12orf73Q69YU5 71 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 KLHL24Q6TFL4 600 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 MEX3BQ6ZN04 569 aaKnown RBP18.65■□□□□ 0.58
CASC4-204ENST00000557945 OR6V1Q8N148 313 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 OR9Q1Q8NGQ5 310 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 NRG4Q8WWG1 115 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 HTRA1Q92743 480 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 ZC3HAV1LQ96H79 300 aaKnown RBP18.65■□□□□ 0.58
CASC4-204ENST00000557945 FOXN4Q96NZ1 517 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 WFIKKN1Q96NZ8 548 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 PSMG3-AS1Q96PY0 264 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 USB1Q9BQ65 265 aaKnown RBP18.65■□□□□ 0.58
CASC4-204ENST00000557945 OR10A4Q9H209 315 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 TMEM38BQ9NVV0 291 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 B9D1Q9UPM9 204 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 UGT2A1Q9Y4X1 527 aa18.65■□□□□ 0.58
CASC4-204ENST00000557945 DOPEY2Q9Y3R5 2298 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 A0A1W2PR80 420 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 SH3D21A4FU49 640 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 FAM171A2A8MVW0 826 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 KIR2DL3P43628 341 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 UBE2NP61088 152 aaKnown RBP18.64■□□□□ 0.57
CASC4-204ENST00000557945 SGCAQ16586 387 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 TIMM23BQ5SRD1 257 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 C17orf78Q8N4C9 275 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 OR2T4Q8NH00 348 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 OR52N5Q8NH56 324 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 MUCL1Q96DR8 90 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 RDH12Q96NR8 316 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 DDOQ99489 341 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 GRIP2Q9C0E4 1043 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 MED20Q9H944 212 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 SLC17A5Q9NRA2 495 aa18.64■□□□□ 0.57
CASC4-204ENST00000557945 COA3Q9Y2R0 106 aaPredicted RBP18.64■□□□□ 0.57
CASC4-204ENST00000557945 PRR23D1E9PI22 279 aaPredicted RBP18.63■□□□□ 0.57
CASC4-204ENST00000557945 M0R129 80 aa18.63■□□□□ 0.57
CASC4-204ENST00000557945 DCTN6O00399 190 aa18.63■□□□□ 0.57
CASC4-204ENST00000557945 FARS2O95363 451 aaKnown RBP18.63■□□□□ 0.57
CASC4-204ENST00000557945 PRR23D2P0DMB1 279 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms