RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 WNT11O96014 354 aa22.35■■□□□ 1.17
SMAD6-202ENST00000557916 BEX5Q5H9J7 111 aa22.35■■□□□ 1.17
SMAD6-202ENST00000557916 FBXW10Q5XX13 1052 aa22.35■■□□□ 1.17
SMAD6-202ENST00000557916 FAHD1Q6P587 224 aa22.35■■□□□ 1.17
SMAD6-202ENST00000557916 SLC25A47Q6Q0C1 308 aa22.35■■□□□ 1.17
SMAD6-202ENST00000557916 PIK3IP1Q96FE7 263 aa22.35■■□□□ 1.17
SMAD6-202ENST00000557916 RASSF1Q9NS23 344 aa22.35■■□□□ 1.17
SMAD6-202ENST00000557916 TMEM38BQ9NVV0 291 aa22.35■■□□□ 1.17
SMAD6-202ENST00000557916 ARPC4-TTLL3A0A0A6YYG9 625 aa22.34■■□□□ 1.17
SMAD6-202ENST00000557916 BHLHE40O14503 412 aa22.34■■□□□ 1.17
SMAD6-202ENST00000557916 HRGP04196 525 aa22.34■■□□□ 1.17
SMAD6-202ENST00000557916 HIST1H1CP16403 213 aaKnown RBP22.34■■□□□ 1.17
SMAD6-202ENST00000557916 CDKN2AP42771 156 aaKnown RBP22.34■■□□□ 1.17
SMAD6-202ENST00000557916 DAPP51397 102 aa22.34■■□□□ 1.17
SMAD6-202ENST00000557916 PTCHD4Q6ZW05 846 aa22.34■■□□□ 1.17
SMAD6-202ENST00000557916 TMEM200AQ86VY9 491 aa22.34■■□□□ 1.17
SMAD6-202ENST00000557916 JAZF1Q86VZ6 243 aa22.34■■□□□ 1.17
SMAD6-202ENST00000557916 ICA1LQ8NDH6 482 aa22.34■■□□□ 1.17
SMAD6-202ENST00000557916 TEX47Q8TBZ9 253 aa22.34■■□□□ 1.17
SMAD6-202ENST00000557916 STMN2Q93045 179 aa22.34■■□□□ 1.17
SMAD6-202ENST00000557916 C1QTNF6Q9BXI9 259 aa22.34■■□□□ 1.17
SMAD6-202ENST00000557916 NPAP1Q9NZP6 1156 aa22.34■■□□□ 1.17
SMAD6-202ENST00000557916 VSX1Q9NZR4 365 aaPredicted RBP22.34■■□□□ 1.17
SMAD6-202ENST00000557916 PRR14LQ5THK1 2151 aa22.34■■□□□ 1.17
SMAD6-202ENST00000557916 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP22.33■■□□□ 1.17
SMAD6-202ENST00000557916 OSMP13725 252 aa22.33■■□□□ 1.17
SMAD6-202ENST00000557916 CAPZA2P47755 286 aa22.33■■□□□ 1.17
SMAD6-202ENST00000557916 TUBA1BP68363 451 aa22.33■■□□□ 1.17
SMAD6-202ENST00000557916 TUBA4AP68366 448 aa22.33■■□□□ 1.17
SMAD6-202ENST00000557916 SLC35F1Q5T1Q4 408 aa22.33■■□□□ 1.17
SMAD6-202ENST00000557916 TUBA1AQ71U36 451 aa22.33■■□□□ 1.17
SMAD6-202ENST00000557916 CCDC36Q8IYA8 594 aa22.33■■□□□ 1.17
SMAD6-202ENST00000557916 SLC22A24Q8N4F4 322 aa22.33■■□□□ 1.17
SMAD6-202ENST00000557916 OR2T33Q8NG76 320 aa22.33■■□□□ 1.17
SMAD6-202ENST00000557916 OR4K13Q8NH42 304 aa22.33■■□□□ 1.17
SMAD6-202ENST00000557916 DNAJC9Q8WXX5 260 aa22.33■■□□□ 1.17
SMAD6-202ENST00000557916 PLPPR2Q96GM1 343 aa22.33■■□□□ 1.17
SMAD6-202ENST00000557916 GABARAPL1Q9H0R8 117 aa22.33■■□□□ 1.17
SMAD6-202ENST00000557916 SYT4Q9H2B2 425 aa22.33■■□□□ 1.17
SMAD6-202ENST00000557916 OAZ3Q9UMX2 235 aa22.33■■□□□ 1.17
SMAD6-202ENST00000557916 POU1F1P28069 291 aa22.32■■□□□ 1.16
SMAD6-202ENST00000557916 ZNF83P51522 516 aa22.32■■□□□ 1.16
SMAD6-202ENST00000557916 LEG1Q6P5S2 330 aa22.32■■□□□ 1.16
SMAD6-202ENST00000557916 LNX2Q8N448 690 aa22.32■■□□□ 1.16
SMAD6-202ENST00000557916 NMNAT3Q96T66 252 aa22.32■■□□□ 1.16
SMAD6-202ENST00000557916 PAPOLBQ9NRJ5 636 aaKnown RBP22.32■■□□□ 1.16
SMAD6-202ENST00000557916 BAIAP2Q9UQB8 552 aa22.32■■□□□ 1.16
SMAD6-202ENST00000557916 UGT2A1Q9Y4X1 527 aa22.32■■□□□ 1.16
SMAD6-202ENST00000557916 SAC3D1A6NKF1 404 aa22.31■■□□□ 1.16
SMAD6-202ENST00000557916 OR8G3PP0DMU2 310 aa22.31■■□□□ 1.16
SMAD6-202ENST00000557916 NR1H2P55055 460 aa22.31■■□□□ 1.16
SMAD6-202ENST00000557916 OR52E2Q8NGJ4 325 aa22.31■■□□□ 1.16
SMAD6-202ENST00000557916 OR4Q3Q8NH05 313 aa22.31■■□□□ 1.16
SMAD6-202ENST00000557916 HTRA1Q92743 480 aa22.31■■□□□ 1.16
SMAD6-202ENST00000557916 CLEC4MQ9H2X3 399 aaPredicted RBP22.31■■□□□ 1.16
SMAD6-202ENST00000557916 ESRP2Q9H6T0 727 aaKnown RBP22.31■■□□□ 1.16
SMAD6-202ENST00000557916 FARS2O95363 451 aaKnown RBP22.31■■□□□ 1.16
SMAD6-202ENST00000557916 RENP00797 406 aa22.31■■□□□ 1.16
SMAD6-202ENST00000557916 PAX7P23759 505 aa22.31■■□□□ 1.16
SMAD6-202ENST00000557916 LOXP28300 417 aaPredicted RBP22.31■■□□□ 1.16
SMAD6-202ENST00000557916 CDAP32320 146 aa22.31■■□□□ 1.16
SMAD6-202ENST00000557916 MRPS34P82930 218 aaKnown RBP22.31■■□□□ 1.16
SMAD6-202ENST00000557916 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.31■■□□□ 1.16
SMAD6-202ENST00000557916 NRN1LQ496H8 165 aa22.31■■□□□ 1.16
SMAD6-202ENST00000557916 NCMAPQ5T1S8 102 aa22.31■■□□□ 1.16
SMAD6-202ENST00000557916 SKA3Q8IX90 412 aa22.31■■□□□ 1.16
SMAD6-202ENST00000557916 SNX18Q96RF0 628 aa22.31■■□□□ 1.16
SMAD6-202ENST00000557916 RERGLQ9H628 205 aa22.31■■□□□ 1.16
SMAD6-202ENST00000557916 KRT84Q9NSB2 600 aa22.31■■□□□ 1.16
SMAD6-202ENST00000557916 DPRXA6NFQ7 191 aa22.3■■□□□ 1.16
SMAD6-202ENST00000557916 M0R1B8 84 aa22.3■■□□□ 1.16
SMAD6-202ENST00000557916 SLC16A7O60669 478 aa22.3■■□□□ 1.16
SMAD6-202ENST00000557916 HLA-HP01893 362 aa22.3■■□□□ 1.16
SMAD6-202ENST00000557916 CTLA4P16410 223 aa22.3■■□□□ 1.16
SMAD6-202ENST00000557916 GUCA1AP43080 201 aaPredicted RBP22.3■■□□□ 1.16
SMAD6-202ENST00000557916 ETFDHQ16134 617 aa22.3■■□□□ 1.16
SMAD6-202ENST00000557916 IQCF1Q8N6M8 205 aa22.3■■□□□ 1.16
SMAD6-202ENST00000557916 SDR9C7Q8NEX9 313 aa22.3■■□□□ 1.16
SMAD6-202ENST00000557916 NANOS1Q8WY41 292 aaKnown RBP22.3■■□□□ 1.16
SMAD6-202ENST00000557916 HS3ST6Q96QI5 342 aa22.3■■□□□ 1.16
SMAD6-202ENST00000557916 SH3GL3Q99963 347 aa22.3■■□□□ 1.16
SMAD6-202ENST00000557916 NUAK2Q9H093 628 aa22.3■■□□□ 1.16
SMAD6-202ENST00000557916 SEC61A2Q9H9S3 476 aa22.3■■□□□ 1.16
SMAD6-202ENST00000557916 SIAEQ9HAT2 523 aa22.3■■□□□ 1.16
SMAD6-202ENST00000557916 FBN2P35556 2912 aa22.29■■□□□ 1.16
SMAD6-202ENST00000557916 A0A1W2PPL8 197 aa22.29■■□□□ 1.16
SMAD6-202ENST00000557916 ZNF503-AS2A6NEH8 195 aa22.29■■□□□ 1.16
SMAD6-202ENST00000557916 KHDRBS3O75525 346 aaKnown RBP22.29■■□□□ 1.16
SMAD6-202ENST00000557916 CD79AP11912 226 aa22.29■■□□□ 1.16
SMAD6-202ENST00000557916 NPR2P20594 1047 aa22.29■■□□□ 1.16
SMAD6-202ENST00000557916 BSPH1Q075Z2 132 aa22.29■■□□□ 1.16
SMAD6-202ENST00000557916 GINS1Q14691 196 aa22.29■■□□□ 1.16
SMAD6-202ENST00000557916 SGCAQ16586 387 aa22.29■■□□□ 1.16
SMAD6-202ENST00000557916 PGGHGQ32M88 737 aa22.29■■□□□ 1.16
SMAD6-202ENST00000557916 KDM4DQ6B0I6 523 aa22.29■■□□□ 1.16
SMAD6-202ENST00000557916 SLC27A4Q6P1M0 643 aa22.29■■□□□ 1.16
SMAD6-202ENST00000557916 TMEM108Q6UXF1 575 aa22.29■■□□□ 1.16
SMAD6-202ENST00000557916 PQLC1Q8N2U9 271 aa22.29■■□□□ 1.16
SMAD6-202ENST00000557916 PARP8Q8N3A8 854 aa22.29■■□□□ 1.16
SMAD6-202ENST00000557916 MOV10Q9HCE1 1003 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms