RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 IL20RAQ9UHF4 553 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 FBXL3Q9UKT7 428 aa12.41□□□□□ -0.42
SUPT16H-208ENST00000557652 ARPC4-TTLL3A0A0A6YYG9 625 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 TUBAL3A6NHL2 446 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 OR5H1A6NKK0 313 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 ZAR1LA6NP61 321 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 H0YJX3 145 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 SOCS2O14508 198 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 KHDRBS3O75525 346 aaKnown RBP12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 WNT11O96014 354 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 IGHV3-9P01782 118 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 RNF224P0DH78 156 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 HIST1H1CP16403 213 aaKnown RBP12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 POU1F1P28069 291 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 SLC25A1P53007 311 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 RUNX1T1Q06455 604 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 FAM27E3Q08E93 113 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 PTGES3Q15185 160 aaKnown RBP12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 C3orf36Q3SXR2 165 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 OGFRL1Q5TC84 451 aaPredicted RBP12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 SLX4IPQ5VYV7 408 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 FOXL2NBQ6ZUU3 175 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 ZBTB46Q86UZ6 589 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 LSRQ86X29 649 aaPredicted RBP12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 SYT14Q8NB59 555 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 NPEPL1Q8NDH3 523 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 OR1K1Q8NGR3 316 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 OR2T4Q8NH00 348 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 TRUB1Q8WWH5 349 aaKnown RBP12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 RASD2Q96D21 266 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 PLEKHA8Q96JA3 519 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 ACTR6Q9GZN1 396 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 RASSF4Q9H2L5 321 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 KCNN3Q9UGI6 736 aa12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 RRP15Q9Y3B9 282 aaKnown RBP12.4□□□□□ -0.42
SUPT16H-208ENST00000557652 CADP27708 2225 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 LYZL6O75951 148 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 OR8G3PP0DMU2 310 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 EPXP11678 715 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 CCKARP32238 428 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 CDKN2AP42771 156 aaKnown RBP12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 PTDSS1P48651 473 aaKnown RBP12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 GLO1Q04760 184 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 LEG1Q6P5S2 330 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 PTCHD4Q6ZW05 846 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 OR52E2Q8NGJ4 325 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 OR4Q3Q8NH05 313 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 OR4K13Q8NH42 304 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 BCL2L2Q92843 193 aaPredicted RBP12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 HRASLS5Q96KN8 279 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 DDOQ99489 341 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 SYT4Q9H2B2 425 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 KCNN2Q9H2S1 579 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 NELFAQ9H3P2 528 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 SIAEQ9HAT2 523 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 SLC17A5Q9NRA2 495 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 TMEM38BQ9NVV0 291 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 SMPD3Q9NY59 655 aaPredicted RBP12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 KCNG2Q9UJ96 466 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 MOKQ9UQ07 419 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 PLCE1Q9P212 2302 aa12.39□□□□□ -0.43
SUPT16H-208ENST00000557652 SH3D21A4FU49 640 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 SURF4O15260 269 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 PRODHO43272 600 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 CLDN1O95832 211 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 HRGP04196 525 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 KIR2DL3P43628 341 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 CDC42P60953 191 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 UBE2NP61088 152 aaKnown RBP12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 ARF1P84077 181 aaKnown RBP12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 LGALS3BPQ08380 585 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 TBRG1Q3YBR2 411 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 PHYHD1Q5SRE7 291 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 ZNF362Q5T0B9 420 aaPredicted RBP12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 FAM27BQ5VT28 67 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 C12orf73Q69YU5 71 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 ZNF813Q6ZN06 617 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 LINGO2Q7L985 606 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 SYT9Q86SS6 491 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 GLB1L2Q8IW92 636 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 S100PBPQ96BU1 408 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 NMNAT3Q96T66 252 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 MED18Q9BUE0 208 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 NMNAT2Q9BZQ4 307 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 GRIP2Q9C0E4 1043 aa12.38□□□□□ -0.43
SUPT16H-208ENST00000557652 COL12A1Q99715 3063 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 RTTNQ86VV8 2226 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 PRR23D1E9PI22 279 aaPredicted RBP12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 E9PQ18 207 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 CASKO14936 926 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 SLC16A6O15403 523 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 MPZL2O60487 215 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 SLC16A7O60669 478 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 MITFO75030 526 aaPredicted RBP12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 RAD51DO75771 328 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 UBL3O95164 117 aa12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 IGFBP1P08833 259 aaPredicted RBP12.37□□□□□ -0.43
SUPT16H-208ENST00000557652 PRR23D2P0DMB1 279 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms