RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 S100A4P26447 101 aaKnown RBP8.19□□□□□ -1.1
SYNE3-205ENST00000557275 TGFBR1P36897 503 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 SLC6A11P48066 632 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 STACQ99469 402 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 FKBP11Q9NYL4 201 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 A8MU76 341 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 SNNO75324 88 aaPredicted RBP8.19□□□□□ -1.1
SYNE3-205ENST00000557275 TMEM184AQ6ZMB5 413 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 FAM3CQ92520 227 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 NEIL1Q96FI4 390 aaPredicted RBP8.19□□□□□ -1.1
SYNE3-205ENST00000557275 ZFYVE21Q9BQ24 234 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 ENSAO43768 121 aaKnown RBP8.19□□□□□ -1.1
SYNE3-205ENST00000557275 HNRNPA1P09651 372 aaKnown RBP eCLIP8.19□□□□□ -1.1
SYNE3-205ENST00000557275 GPM6AP51674 278 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 PAX5Q02548 391 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 THEM4Q5T1C6 240 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 LSMEM1Q8N8F7 131 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 SLC7A6Q92536 515 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 PCYT2Q99447 389 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 FBXO8Q9NRD0 319 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 NXT1Q9UKK6 140 aaKnown RBP8.19□□□□□ -1.1
SYNE3-205ENST00000557275 FCGR2AP12318 317 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 GDF5P43026 501 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 NOVA1P51513 510 aaKnown RBP8.19□□□□□ -1.1
SYNE3-205ENST00000557275 TBC1D28Q2M2D7 210 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 DPY19L2P2Q6ZN68 376 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 C11orf42Q8N5U0 333 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 SHANK1Q9Y566 2161 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 A0A0B4J203 849 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 ZNF264O43296 627 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 FCRLAQ7L513 359 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 RTP4Q96DX8 246 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 NDUFB11Q9NX14 153 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 KLF7O75840 302 aaPredicted RBP8.19□□□□□ -1.1
SYNE3-205ENST00000557275 UBE2IP63279 158 aaKnown RBP8.19□□□□□ -1.1
SYNE3-205ENST00000557275 CLDN19Q8N6F1 224 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 OR52L2PQ8NGH6 319 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 KHSRPQ92945 711 aaKnown RBP eCLIP8.19□□□□□ -1.1
SYNE3-205ENST00000557275 MT-ATP6P00846 226 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 NRARPQ7Z6K4 114 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 NAXDQ8IW45 347 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 ULBP2Q9BZM5 246 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 IER3IP1Q9Y5U9 82 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 TET1Q8NFU7 2136 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 RAB9AP51151 201 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 GJC3Q8NFK1 279 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 SLC26A10Q8NG04 563 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 SAT2Q96F10 170 aaPredicted RBP8.19□□□□□ -1.1
SYNE3-205ENST00000557275 COMMD5Q9GZQ3 224 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 NID2Q14112 1375 aa8.19□□□□□ -1.1
SYNE3-205ENST00000557275 MYOM1P52179 1685 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 CNMDO75829 334 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 SRYQ05066 204 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 ZNF573Q86YE8 665 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 MUC15Q8N387 334 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 ACVR1CQ8NER5 493 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 CCNL2Q96S94 520 aaPredicted RBP8.18□□□□□ -1.1
SYNE3-205ENST00000557275 KIR2DS5A0A0G2JLQ3 304 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 A0A0G2JNG1 304 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 SERTM2A0A1B0GWG4 89 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 KIR2DS3K7RE56 304 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 ARPC3O15145 178 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 GPR32O75388 356 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 CCL23P55773 120 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 UBE2MP61081 183 aaKnown RBP8.18□□□□□ -1.1
SYNE3-205ENST00000557275 KIR2DS5Q14953 304 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 OR4A47Q6IF82 309 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 Q8N9G6 341 aaPredicted RBP8.18□□□□□ -1.1
SYNE3-205ENST00000557275 OR4C16Q8NGL9 310 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 OR4A4PQ8NGN8 299 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 EMG1Q92979 244 aaKnown RBP8.18□□□□□ -1.1
SYNE3-205ENST00000557275 PPP2CBP62714 309 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 ZNF648Q5T619 568 aaPredicted RBP8.18□□□□□ -1.1
SYNE3-205ENST00000557275 CHRNA10Q9GZZ6 450 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 DMRT3Q9NQL9 472 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 PIRO00625 290 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 BMP5P22003 454 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 RPL24P83731 157 aaKnown RBP8.18□□□□□ -1.1
SYNE3-205ENST00000557275 TTC32Q5I0X7 151 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 OR52D1Q9H346 318 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 BMPR1BO00238 502 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 HIST1H1TP22492 207 aaPredicted RBP8.18□□□□□ -1.1
SYNE3-205ENST00000557275 BMPR1AP36894 532 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 Q3ZCU0 254 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 IGDCC3Q8IVU1 814 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 UBAC2Q8NBM4 344 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 SLC25A46Q96AG3 418 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 AP5S1Q9NUS5 200 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 OR4E1P0C645 316 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 CBR1P16152 277 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 PSMB6P28072 239 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 MPGP29372 298 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 DCTP40126 519 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 EMX1Q04741 257 aaPredicted RBP8.18□□□□□ -1.1
SYNE3-205ENST00000557275 SCGB1D4Q6XE38 83 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 VRK3Q8IV63 474 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 LGALS14Q8TCE9 139 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 LHX4Q969G2 390 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 MIEN1Q9BRT3 115 aa8.18□□□□□ -1.1
SYNE3-205ENST00000557275 EDEM2Q9BV94 578 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms