RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 C11orf40Q8WZ69 217 aa12.59□□□□□ -0.39
CHD8-211ENST00000556833 HIST1H2ACQ93077 130 aa12.59□□□□□ -0.39
CHD8-211ENST00000556833 SLC25A44Q96H78 314 aaPredicted RBP12.59□□□□□ -0.39
CHD8-211ENST00000556833 DENND2DQ9H6A0 471 aaPredicted RBP12.59□□□□□ -0.39
CHD8-211ENST00000556833 ZNF385DQ9H6B1 395 aa12.59□□□□□ -0.39
CHD8-211ENST00000556833 TMEM38AQ9H6F2 299 aa12.59□□□□□ -0.39
CHD8-211ENST00000556833 ESM1Q9NQ30 184 aa12.59□□□□□ -0.39
CHD8-211ENST00000556833 SLC52A3Q9NQ40 469 aa12.59□□□□□ -0.39
CHD8-211ENST00000556833 DECR2Q9NUI1 292 aa12.59□□□□□ -0.39
CHD8-211ENST00000556833 UBAP1Q9NZ09 502 aa12.59□□□□□ -0.39
CHD8-211ENST00000556833 FBXL3Q9UKT7 428 aa12.59□□□□□ -0.39
CHD8-211ENST00000556833 WIPI2Q9Y4P8 454 aa12.59□□□□□ -0.39
CHD8-211ENST00000556833 TANC2Q9HCD6 1990 aa12.59□□□□□ -0.39
CHD8-211ENST00000556833 IQCMA0A1B0GVH7 501 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 CLDN25C9JDP6 229 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 TRIM77I1YAP6 450 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 SHOX2O60902 331 aaPredicted RBP12.58□□□□□ -0.4
CHD8-211ENST00000556833 SLC2A10O95528 541 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 BCL10O95999 233 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 GPX2P18283 190 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 TNFRSF1BP20333 461 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 MPV17P39210 176 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 UCP2P55851 309 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 LCN2P80188 198 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 SLC36A2Q495M3 483 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 TMEM255AQ5JRV8 349 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 SWT1Q5T5J6 900 aaKnown RBP12.58□□□□□ -0.4
CHD8-211ENST00000556833 DCAF12L2Q5VW00 463 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 ZNF613Q6PF04 617 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 DLEU7Q6UYE1 221 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 LINC00114Q6XXX2 140 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 DHDDSQ86SQ9 333 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 C11orf65Q8NCR3 313 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 NOXO1Q8NFA2 376 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 PFN4Q8NHR9 129 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 NSMAFQ92636 917 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 MCHR2Q969V1 340 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 TLCD1Q96CP7 247 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 DUX5Q96PT3 197 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 GAL3ST1Q99999 423 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 C1QTNF5Q9BXJ0 243 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 SAP30LQ9HAJ7 183 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 TMBIM4Q9HC24 238 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 GPR160Q9UJ42 338 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 CORO2BQ9UQ03 480 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 PPIAL4AQ9Y536 164 aa12.58□□□□□ -0.4
CHD8-211ENST00000556833 PKD1L1Q8TDX9 2849 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 IGLV3-9A0A075B6K5 115 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 A0A0G2JMP0 313 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 A0A0X1KG70 313 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 KCNAB3O43448 404 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 DEAF1O75398 565 aaPredicted RBP12.57□□□□□ -0.4
CHD8-211ENST00000556833 IGHV2-5P01817 119 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 IGHG1P01857 330 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 ZNF250P15622 560 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 APLNRP35414 380 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 ZNF84P51523 738 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 PCBP3P57721 371 aaKnown RBP12.57□□□□□ -0.4
CHD8-211ENST00000556833 MRPS11P82912 194 aaKnown RBP12.57□□□□□ -0.4
CHD8-211ENST00000556833 PLP2Q04941 152 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 FMODQ06828 376 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 RPL18Q07020 188 aaKnown RBP12.57□□□□□ -0.4
CHD8-211ENST00000556833 SCGB2A2Q13296 93 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 RUNDC3AQ59EK9 446 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 SPRNQ5BIV9 151 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 PABPC1L2AQ5JQF8 200 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 BPIFB2Q8N4F0 458 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 CPEB3Q8NE35 698 aaKnown RBP12.57□□□□□ -0.4
CHD8-211ENST00000556833 BHLHE22Q8NFJ8 381 aaPredicted RBP12.57□□□□□ -0.4
CHD8-211ENST00000556833 OR4M2Q8NGB6 313 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 AKR7LQ8NHP1 331 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 ZNF519Q8TB69 540 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 LRRC8CQ8TDW0 803 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 ZFAND2BQ8WV99 257 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 IPCEF1Q8WWN9 437 aaPredicted RBP12.57□□□□□ -0.4
CHD8-211ENST00000556833 CCL17Q92583 94 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 RAB39BQ96DA2 213 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 DCAF16Q9NXF7 216 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 SLCO1C1Q9NYB5 712 aa12.57□□□□□ -0.4
CHD8-211ENST00000556833 IGKV1D-43A0A0B4J1Z2 117 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 SLC22A23A1A5C7 686 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 TMEM89A2RUT3 159 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 TRAPPC13A5PLN9 417 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 TRMUO75648 421 aaKnown RBP12.56□□□□□ -0.4
CHD8-211ENST00000556833 FUT1P19526 365 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 CD247P20963 164 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 AQP2P41181 271 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 CRYBB2P43320 205 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 MRPL19P49406 292 aaKnown RBP12.56□□□□□ -0.4
CHD8-211ENST00000556833 ZNF81P51508 661 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 ERVK-25P63136 954 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 ZP4Q12836 540 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 TOP3AQ13472 1001 aaPredicted RBP12.56□□□□□ -0.4
CHD8-211ENST00000556833 SGCAQ16586 387 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 HFEQ30201 348 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 PCGF3Q3KNV8 242 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 THEM4Q5T1C6 240 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 C1QL2Q7Z5L3 287 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 ZNF101Q8IZC7 436 aa12.56□□□□□ -0.4
CHD8-211ENST00000556833 MOSPD2Q8NHP6 518 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms