RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 LSM1O15116 133 aaKnown RBP2.63□□□□□ -1.99
SCFD1-221ENST00000556534 SS18L1O75177 396 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-221ENST00000556534 OR2J3O76001 311 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 PLEKP08567 350 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-221ENST00000556534 PNMA6AP0CW24 399 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-221ENST00000556534 ABOP16442 354 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 TUBG1P23258 451 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 CMA1P23946 247 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 BTCP35070 178 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 LONP1P36776 959 aaKnown RBP2.63□□□□□ -1.99
SCFD1-221ENST00000556534 NMUP48645 174 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 RAB9AP51151 201 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 RGS8P57771 180 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-221ENST00000556534 VPS26BQ4G0F5 336 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 FRMPD2BQ6IN97 320 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 C1orf94Q6P1W5 598 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 TMEM53Q6P2H8 277 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 PP632Q6XCG6 107 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 ZNF836Q6ZNA1 936 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 ZNF546Q86UE3 836 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 KATNAL2Q8IYT4 538 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 OR10G9Q8NGN4 311 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 ZNF596Q8TC21 504 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 DTX3LQ8TDB6 740 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 ZNF75CPQ92670 426 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-221ENST00000556534 ACTR6Q9GZN1 396 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 OR51M1Q9H341 326 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 CDC42EP4Q9H3Q1 356 aaKnown RBP2.63□□□□□ -1.99
SCFD1-221ENST00000556534 TPK1Q9H3S4 243 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 TUBG2Q9NRH3 451 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 DEC1Q9P2X7 70 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 TBC1D24Q9ULP9 559 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 CHTOPQ9Y3Y2 248 aaKnown RBP2.63□□□□□ -1.99
SCFD1-221ENST00000556534 SLC25A15Q9Y619 301 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 CDHR2Q9BYE9 1310 aa2.63□□□□□ -1.99
SCFD1-221ENST00000556534 LRP4O75096 1905 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 KIR2DL5BA0A0G2JN68 375 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 KIR2DL5BA0A0G2JPC4 375 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 SMCO3A2RU48 225 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 IGHV2-5P01817 119 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 ATP5C1P36542 298 aaKnown RBP2.62□□□□□ -1.99
SCFD1-221ENST00000556534 CCT6AP40227 531 aaKnown RBP2.62□□□□□ -1.99
SCFD1-221ENST00000556534 NSG1P42857 185 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 NAMPTP43490 491 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 RPS9P46781 194 aaKnown RBP2.62□□□□□ -1.99
SCFD1-221ENST00000556534 YAP1P46937 504 aaKnown RBP2.62□□□□□ -1.99
SCFD1-221ENST00000556534 CSNK1EP49674 416 aaKnown RBP2.62□□□□□ -1.99
SCFD1-221ENST00000556534 GPM6AP51674 278 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 FBXW4P57775 412 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 KRTAP10-10P60014 251 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 IRF8Q02556 426 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 ACVR1Q04771 509 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 REG3AQ06141 175 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 MAB21L1Q13394 359 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 TGFBIQ15582 683 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 HADHQ16836 314 aaKnown RBP2.62□□□□□ -1.99
SCFD1-221ENST00000556534 MARCH8Q5T0T0 291 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 PIP5KL1Q5T9C9 394 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 CCDC73Q6ZRK6 1079 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 EIF3MQ7L2H7 374 aaKnown RBP2.62□□□□□ -1.99
SCFD1-221ENST00000556534 CENPQQ7L2Z9 268 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-221ENST00000556534 KIR2DL5AQ8N109 375 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 COMMD1Q8N668 190 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 PQLC3Q8N755 202 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 ACOT4Q8N9L9 421 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 OR4F15Q8NGB8 312 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 OR1S2Q8NGQ3 325 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 KIR2DL5BQ8NHK3 375 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 PYROXD1Q8WU10 500 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 ZNF707Q96C28 371 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-221ENST00000556534 CEP170P1Q96L14 293 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 ZNF578Q96N58 590 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-221ENST00000556534 TSNARE1Q96NA8 513 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 OR8B4Q96RC9 309 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 TMEM59Q9BXS4 323 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 MFFQ9GZY8 342 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 GIN1Q9NXP7 522 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 NUP50Q9UKX7 468 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 MMP17Q9ULZ9 603 aa2.62□□□□□ -1.99
SCFD1-221ENST00000556534 SUPT3HB4E1H0 165 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 GOSR2O14653 212 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 RAB29O14966 203 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 CHST1O43916 411 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 SUPT3HO75486 399 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 FGF1P05230 155 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 ANXA5P08758 320 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 RALBP11234 206 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 CCNB1P14635 433 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 ZNF24P17028 368 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 IFNA8P32881 189 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 MAGEA1P43355 309 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 SLC11A1P49279 550 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 MNAT1P51948 309 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 CLDN8P56748 225 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 EIF3EP60228 445 aaKnown RBP2.61□□□□□ -1.99
SCFD1-221ENST00000556534 ACTA1P68133 377 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 SELENBP1Q13228 472 aa2.61□□□□□ -1.99
SCFD1-221ENST00000556534 ITIH4Q14624 930 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms