RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 MED12Q93074 2177 aa8.17□□□□□ -1.1
ACTN1-218ENST00000556343 TRGV8A0A0C4DH27 118 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 A0A1W2PPL8 197 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 E9PLN8 166 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 XPNPEP2O43895 674 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 WISP2O76076 250 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 FARS2O95363 451 aaKnown RBP8.16□□□□□ -1.1
ACTN1-218ENST00000556343 IL18BPO95998 194 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 HRGP04196 525 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 GYPBP06028 91 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 LYNP07948 512 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 OR2T7P0C7T2 308 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 SLC2A5P22732 501 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 AGTR1P30556 359 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 PYCR1P32322 319 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 CAPZA2P47755 286 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 OR3A2P47893 321 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF133P52736 654 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-218ENST00000556343 NUDT6P53370 316 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 SH3BGRP55822 239 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-218ENST00000556343 SIRPAP78324 504 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 TGFBR3Q03167 851 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 HSF2Q03933 536 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 RUNX1T1Q06455 604 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 ST3GAL4Q11206 333 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 GGTLC2Q14390 218 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 SMN1Q16637 294 aaKnown RBP8.16□□□□□ -1.1
ACTN1-218ENST00000556343 HIST3H3Q16695 136 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 PRR30Q53SZ7 412 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-218ENST00000556343 C10orf128Q5T292 105 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 FBXW9Q5XUX1 488 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 MTFR2Q6P444 385 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 SLC25A47Q6Q0C1 308 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 AHSA2Q719I0 299 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 SLC16A9Q7RTY1 509 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 PRSS48Q7RTY5 328 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 BCDIN3DQ7Z5W3 292 aaKnown RBP8.16□□□□□ -1.1
ACTN1-218ENST00000556343 LSRQ86X29 649 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF454Q8N9F8 522 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 C9orf106Q8NAJ2 232 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 BBS1Q8NFJ9 593 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 OR51G2Q8NGK0 314 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 OR2AJ1Q8NGZ0 328 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 OR2T27Q8NH04 317 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 ZMYND19Q96E35 227 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-218ENST00000556343 INTS14Q96SY0 518 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 VKORC1Q9BQB6 163 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 TTYH2Q9BSA4 534 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 WACQ9BTA9 647 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 SFXN3Q9BWM7 321 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 YIPF3Q9GZM5 350 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 PIGMQ9H3S5 423 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 DUSP21Q9H596 190 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 FGF20Q9NP95 211 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-218ENST00000556343 AASSQ9UDR5 926 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 FOXD3Q9UJU5 478 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-218ENST00000556343 ING1Q9UK53 422 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-218ENST00000556343 ERGIC3Q9Y282 383 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 COA3Q9Y2R0 106 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-218ENST00000556343 EXOSC1Q9Y3B2 195 aaKnown RBP8.16□□□□□ -1.1
ACTN1-218ENST00000556343 TLN1Q9Y490 2541 aaKnown RBP8.16□□□□□ -1.1
ACTN1-218ENST00000556343 PCDHGB5Q9Y5G0 923 aa8.16□□□□□ -1.1
ACTN1-218ENST00000556343 PKD1L2Q7Z442 2459 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 NCKAP5O14513 1909 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 PRRC2CQ9Y520 2896 aaKnown RBP8.15□□□□□ -1.1
ACTN1-218ENST00000556343 IGLV1-36A0A0B4J1U3 117 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 A0A1B0GUH1 482 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 DAPL1A0PJW8 107 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 CCDC182A6NF36 153 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 FAM171A2A8MVW0 826 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF670-ZNF695F2Z2N8 137 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 RPL36A-HNRNPH2H7BZ11 118 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF593O00488 134 aaPredicted RBP8.15□□□□□ -1.1
ACTN1-218ENST00000556343 DVL2O14641 736 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 CDK1P06493 297 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 SBK2P0C263 348 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 GLI4P10075 376 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 CLUP10909 449 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 CTLA4P16410 223 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 CEACAM8P31997 349 aaPredicted RBP8.15□□□□□ -1.1
ACTN1-218ENST00000556343 SLC15A1P46059 708 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 ENTPD1P49961 510 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 PCBD1P61457 104 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 LSM6P62312 80 aaKnown RBP8.15□□□□□ -1.1
ACTN1-218ENST00000556343 TUBA4AP68366 448 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 ADAM8P78325 824 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 SLC35A2P78381 396 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 ROR2Q01974 943 aaKnown RBP8.15□□□□□ -1.1
ACTN1-218ENST00000556343 MVKQ03426 396 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 PMPCAQ10713 525 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 SGCAQ16586 387 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 NRN1LQ496H8 165 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 RNLSQ5VYX0 342 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 ZNF773Q6PK81 442 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 PCSK4Q6UW60 755 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 TMPRSS11AQ6ZMR5 421 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 BEND4Q6ZU67 534 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 NUFIP2Q7Z417 695 aaKnown RBP8.15□□□□□ -1.1
ACTN1-218ENST00000556343 DPPA2Q7Z7J5 298 aa8.15□□□□□ -1.1
ACTN1-218ENST00000556343 EGFL6Q8IUX8 553 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms