RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 ABHD16AO95870 558 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 CELA2AP08217 269 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 UCHL1P09936 223 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 TGM1P22735 817 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 AHCYP23526 432 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 GTF2E2P29084 291 aaKnown RBP7.43□□□□□ -1.22
ATXN3-235ENST00000556082 PTGS2P35354 604 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 GDI2P50395 445 aaKnown RBP7.43□□□□□ -1.22
ATXN3-235ENST00000556082 RPS11P62280 158 aaKnown RBP eCLIP7.43□□□□□ -1.22
ATXN3-235ENST00000556082 PPP3R1P63098 170 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 HSF1Q00613 529 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 ROM1Q03395 351 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 MXD1Q05195 221 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 SLC3A1Q07837 685 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 CDC20Q12834 499 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 HNRNPA0Q13151 305 aaKnown RBP7.43□□□□□ -1.22
ATXN3-235ENST00000556082 MYBPHQ13203 477 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 SELENBP1Q13228 472 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 SF3A2Q15428 464 aaKnown RBP7.43□□□□□ -1.22
ATXN3-235ENST00000556082 PCK2Q16822 640 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 TP53I3Q53FA7 332 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 YIF1BQ5BJH7 314 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 TEX30Q5JUR7 227 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 BICRALQ6AI39 1079 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 TIGD3Q6B0B8 471 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 JMJD6Q6NYC1 403 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-235ENST00000556082 C3orf33Q6P1S2 294 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 MZT2AQ6P582 158 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 DNM1P34Q6PK57 102 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 XKRXQ6PP77 449 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 CEACAM19Q7Z692 300 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 PIP4P1Q86T03 277 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 LYSMD2Q8IV50 215 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 PM20D2Q8IYS1 436 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 SYT14Q8NB59 555 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 OR4K17Q8NGC6 315 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 OTOSQ8NHW6 89 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 SMAP2Q8WU79 429 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-235ENST00000556082 ASB10Q8WXI3 467 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 TMEM41AQ96HV5 264 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 ARL5BQ96KC2 179 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 TSSK2Q96PF2 358 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 INTS14Q96SY0 518 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 NPAS1Q99742 590 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 ATF6BQ99941 703 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 EDEM2Q9BV94 578 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.43□□□□□ -1.22
ATXN3-235ENST00000556082 MIXL1Q9H2W2 232 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 SP140LQ9H930 580 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 PROK2Q9HC23 129 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 ZNF160Q9HCG1 818 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 MBNL3Q9NUK0 354 aaKnown RBP7.43□□□□□ -1.22
ATXN3-235ENST00000556082 FBXL2Q9UKC9 423 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 ZNF281Q9Y2X9 895 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 MRPS18CQ9Y3D5 142 aaKnown RBP7.43□□□□□ -1.22
ATXN3-235ENST00000556082 V9GYH0 126 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 NCOR1O75376 2440 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 BDP1A6H8Y1 2624 aa7.43□□□□□ -1.22
ATXN3-235ENST00000556082 TRBV2A0A0J9YWF9 115 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 C4orf47A7E2U8 309 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 FAM171A2A8MVW0 826 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 C11orf98E9PRG8 122 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 ZIC3O60481 467 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 SLC19A2O60779 497 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 CBR3O75828 277 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 ZNF432O94892 652 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 AKR7A3O95154 331 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 HRGP04196 525 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 KRT8P05787 483 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 RNASE1P07998 156 aaKnown RBP7.42□□□□□ -1.22
ATXN3-235ENST00000556082 OCM2P0CE71 109 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 OCMP0CE72 109 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-235ENST00000556082 TFPIP10646 304 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 LIFP15018 202 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 ZNF17P17021 662 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 EVX1P49640 407 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 P2RY4P51582 365 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 DSCR4P56555 118 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-235ENST00000556082 SLC35A1P78382 337 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 TLE3Q04726 772 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 GLO1Q04760 184 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 Q0VFX4 171 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 DBPQ10586 325 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-235ENST00000556082 DNASE1L3Q13609 305 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 RIN1Q13671 783 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 ATP1A4Q13733 1029 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 OR7A5Q15622 319 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 CSRP2Q16527 193 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 TRIM16LQ309B1 348 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 ZMAT1Q5H9K5 638 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 HBMQ6B0K9 141 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 SLC18B1Q6NT16 456 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 IL20RBQ6UXL0 311 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 RPTNQ6XPR3 784 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 SLC35D2Q76EJ3 337 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 FAM214BQ7L5A3 538 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 HDDC2Q7Z4H3 204 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 FAM220AQ7Z4H9 259 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 RFLNBQ8N5W9 214 aa7.42□□□□□ -1.22
ATXN3-235ENST00000556082 TMEM156Q8N614 296 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms