RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ZNF346Q9UL40 294 aaKnown RBP17.75■□□□□ 0.43
VTI1B-205ENST00000555543 UGT2A1Q9Y4X1 527 aa17.75■□□□□ 0.43
VTI1B-205ENST00000555543 B2RBV5 119 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 SSX4O60224 188 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 UBL3O95164 117 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 RAB36O95755 333 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 OR4A8P0C604 315 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 THBS4P35443 961 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 SERPINF1P36955 418 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 LIMS1P48059 325 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 RIPPLY3P57055 190 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 CD47Q08722 323 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 RAB39AQ14964 217 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 TAF11Q15544 211 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 ANKDD1AQ495B1 522 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 KRT80Q6KB66 452 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 CDK20Q8IZL9 346 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 OR52J3Q8NH60 311 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 NSL1Q96IY1 281 aa17.74■□□□□ 0.43
VTI1B-205ENST00000555543 BARX1Q9HBU1 254 aaPredicted RBP17.74■□□□□ 0.43
VTI1B-205ENST00000555543 STX18Q9P2W9 335 aaKnown RBP17.74■□□□□ 0.43
VTI1B-205ENST00000555543 PDE5AO76074 875 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 T-ENOLP0DO92 83 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 ATP6V1B2P21281 511 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 CDAP32320 146 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 OMPP47874 163 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 ZNF84P51523 738 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 MNAT1P51948 309 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 CHRNB3Q05901 458 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 SNTB2Q13425 540 aaKnown RBP17.73■□□□□ 0.43
VTI1B-205ENST00000555543 SPATS1Q496A3 300 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 ZBED5Q49AG3 693 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 CLEC9AQ6UXN8 241 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 RRM2BQ7LG56 351 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 NABP1Q96AH0 204 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 DENND2DQ9H6A0 471 aaPredicted RBP17.73■□□□□ 0.43
VTI1B-205ENST00000555543 ZNF442Q9H7R0 627 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 TMEM5Q9Y2B1 443 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 ADAM18Q9Y3Q7 739 aa17.73■□□□□ 0.43
VTI1B-205ENST00000555543 CSPG4Q6UVK1 2322 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 RNF223E7ERA6 249 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 H7C1C5 153 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 RRP9O43818 475 aaKnown RBP17.72■□□□□ 0.43
VTI1B-205ENST00000555543 LY6HO94772 140 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 FARS2O95363 451 aaKnown RBP17.72■□□□□ 0.43
VTI1B-205ENST00000555543 LY6G6DO95868 133 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 ZNF35P13682 527 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 NUDT6P53370 316 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 LCN6P62502 163 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 ERVK-25P63136 954 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 DAG1Q14118 895 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 RAB35Q15286 201 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 MSMPQ1L6U9 139 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 NRN1LQ496H8 165 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 SLC25A47Q6Q0C1 308 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 CYP2R1Q6VVX0 501 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 RINLQ6ZS11 566 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 MAPK1IP1LQ8NDC0 245 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 IL17RDQ8NFM7 739 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 NSMAFQ92636 917 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 GPA33Q99795 319 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 ALG12Q9BV10 488 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 SMURF2Q9HAU4 748 aa17.72■□□□□ 0.43
VTI1B-205ENST00000555543 GPRIN2O60269 458 aa17.71■□□□□ 0.43
VTI1B-205ENST00000555543 SERPINA5P05154 406 aa17.71■□□□□ 0.43
VTI1B-205ENST00000555543 ITGA2P17301 1181 aa17.71■□□□□ 0.43
VTI1B-205ENST00000555543 NR4A1P22736 598 aa17.71■□□□□ 0.43
VTI1B-205ENST00000555543 RPL4P36578 427 aaKnown RBP17.71■□□□□ 0.43
VTI1B-205ENST00000555543 FXYD6P3P58550 94 aa17.71■□□□□ 0.43
VTI1B-205ENST00000555543 SNRPD2P62316 118 aaKnown RBP17.71■□□□□ 0.43
VTI1B-205ENST00000555543 MRPS34P82930 218 aaKnown RBP17.71■□□□□ 0.43
VTI1B-205ENST00000555543 SPIBQ01892 262 aa17.71■□□□□ 0.43
VTI1B-205ENST00000555543 EFNB3Q15768 340 aa17.71■□□□□ 0.43
VTI1B-205ENST00000555543 FAM205BPQ63HN1 556 aa17.71■□□□□ 0.43
VTI1B-205ENST00000555543 SLC16A14Q7RTX9 510 aa17.71■□□□□ 0.43
VTI1B-205ENST00000555543 LRRC18Q8N456 261 aa17.71■□□□□ 0.43
VTI1B-205ENST00000555543 RSRC1Q96IZ7 334 aaKnown RBP17.71■□□□□ 0.43
VTI1B-205ENST00000555543 SORCS2Q96PQ0 1159 aa17.71■□□□□ 0.43
VTI1B-205ENST00000555543 PLK3Q9H4B4 646 aa17.71■□□□□ 0.43
VTI1B-205ENST00000555543 SIGLEC7Q9Y286 467 aa17.71■□□□□ 0.43
VTI1B-205ENST00000555543 PMF1-BGLAPU3KQ54 211 aa17.71■□□□□ 0.43
VTI1B-205ENST00000555543 IGHV4-30-2A0A087WSY4 118 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 SH3PXD2BA1X283 911 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 B9A039 149 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 ENTPD5O75356 428 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 PTP4A3O75365 173 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 FABP3P05413 133 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 HEXAP06865 529 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 CD14P08571 375 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 MMP7P09237 267 aaPredicted RBP17.7■□□□□ 0.42
VTI1B-205ENST00000555543 NPR2P20594 1047 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 CALB2P22676 271 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 MESTQ5EB52 335 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 THSD4Q6ZMP0 1018 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 FAM122BQ7Z309 247 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 SVOPLQ8N434 492 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 PAQR4Q8N4S7 273 aaPredicted RBP17.7■□□□□ 0.42
VTI1B-205ENST00000555543 ZNF525Q8N782 197 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 ARIH2OSQ8N7S6 290 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 Q96M85 177 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms