RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 TDGF1P13385 188 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 ANXA8P13928 327 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 AK4P27144 223 aaPredicted RBP3.65□□□□□ -1.83
VRK1-205ENST00000555402 GTF2E2P29084 291 aaKnown RBP3.65□□□□□ -1.83
VRK1-205ENST00000555402 FOXN2P32314 431 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 CCT6AP40227 531 aaKnown RBP3.65□□□□□ -1.83
VRK1-205ENST00000555402 CDKN1BP46527 198 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 CSNK1DP48730 415 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 ETV1P50549 477 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 SSR4P51571 173 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 CCR8P51685 355 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 TDGF1P3P51864 188 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 SMARCB1Q12824 385 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 IL18Q14116 193 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 HADHQ16836 314 aaKnown RBP3.65□□□□□ -1.83
VRK1-205ENST00000555402 COA6Q5JTJ3 125 aaKnown RBP3.65□□□□□ -1.83
VRK1-205ENST00000555402 SOHLH1Q5JUK2 328 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 LY6G6FQ5SQ64 297 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 ANXA8L1Q5VT79 327 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 Q6ZSR3 168 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 RNF175Q8N4F7 328 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 Q8N9W7 124 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 FAM184AQ8NB25 1140 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 FBXL13Q8NEE6 735 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 OR6X1Q8NH79 312 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 DNAJC19Q96DA6 116 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 TGS1Q96RS0 853 aaKnown RBP3.65□□□□□ -1.83
VRK1-205ENST00000555402 GABARAPL3Q9BY60 117 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 SLCO1B3Q9NPD5 702 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 TRAPPC4Q9Y296 219 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 GOLT1BQ9Y3E0 138 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 CACNG2Q9Y698 323 aa3.65□□□□□ -1.83
VRK1-205ENST00000555402 PLEKHG2Q9H7P9 1386 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 TNIKQ9UKE5 1360 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 ZNF318Q5VUA4 2279 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 A0A0B4J2A0 478 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 A0A1B0GUA9 196 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 CIB4A0PJX0 185 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 ZNF726A6NNF4 738 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 H0Y9J4 135 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 ZNF861PO60384 105 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 TPM1P09493 284 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 CRISP2P16562 243 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 ZNF17P17021 662 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 CCNE1P24864 410 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 SERPINB5P36952 375 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 SLC1A1P43005 524 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 CD151P48509 253 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 FGF8P55075 233 aaPredicted RBP3.64□□□□□ -1.83
VRK1-205ENST00000555402 RAB10P61026 200 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 RPS21P63220 83 aaKnown RBP3.64□□□□□ -1.83
VRK1-205ENST00000555402 TWF1Q12792 350 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 PRPSAP1Q14558 356 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 CLINT1Q14677 625 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 SGCAQ16586 387 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 C22orf42Q6IC83 251 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 REEP3Q6NUK4 255 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 CLEC2AQ6UVW9 174 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 COX15Q7KZN9 410 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 LINC01555Q8NAE3 123 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 STARD8Q92502 1023 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 PEX13Q92968 403 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 PIK3IP1Q96FE7 263 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 SH3GL3Q99963 347 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 BPIFA3Q9BQP9 254 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 MTG1Q9BT17 334 aaPredicted RBP3.64□□□□□ -1.83
VRK1-205ENST00000555402 RACGAP1Q9H0H5 632 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 RPF2Q9H7B2 306 aaKnown RBP3.64□□□□□ -1.83
VRK1-205ENST00000555402 UGT1A7Q9HAW7 530 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 UGT1A10Q9HAW8 530 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 UGT1A8Q9HAW9 530 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 FANCEQ9HB96 536 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 CTPS2Q9NRF8 586 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 SHPKQ9UHJ6 478 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 PRO0461Q9UI25 63 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 CHTOPQ9Y3Y2 248 aaKnown RBP3.64□□□□□ -1.83
VRK1-205ENST00000555402 CROCCQ5TZA2 2017 aa3.64□□□□□ -1.83
VRK1-205ENST00000555402 TMEM94Q12767 1356 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 GOLGA6L7A0A1B0GV03 622 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 SIRPB1O00241 398 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 FGF4P08620 206 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 POLR2MP0CAP2 368 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 MYL2P10916 166 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 RCC1P18754 421 aaPredicted RBP3.63□□□□□ -1.83
VRK1-205ENST00000555402 OR1G1P47890 313 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 UQCRFS1P47985 274 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 CX3CR1P49238 355 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 NUTF2P61970 127 aaKnown RBP3.63□□□□□ -1.83
VRK1-205ENST00000555402 ADARB1P78563 741 aaKnown RBP3.63□□□□□ -1.83
VRK1-205ENST00000555402 PSG5Q15238 335 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 GUCA2BQ16661 112 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 ZNF621Q6ZSS3 439 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 TMEM179Q6ZVK1 233 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 H2AFVQ71UI9 128 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 PDCL2Q8N4E4 241 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 MREGQ8N565 214 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 DRAXINQ8NBI3 349 aaPredicted RBP3.63□□□□□ -1.83
VRK1-205ENST00000555402 NPBQ8NG41 125 aa3.63□□□□□ -1.83
VRK1-205ENST00000555402 TSEN15Q8WW01 171 aaKnown RBP3.63□□□□□ -1.83
VRK1-205ENST00000555402 AURKBQ96GD4 344 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms