RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ZNF773Q6PK81 442 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 B3GNT6Q6ZMB0 384 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 SPARTQ8N0X7 666 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 STX19Q8N4C7 294 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 OR6X1Q8NH79 312 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 NMD3Q96D46 503 aaKnown RBP9.52□□□□□ -0.88
TDP1-211ENST00000555178 ALG12Q9BV10 488 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 SF3B5Q9BWJ5 86 aaKnown RBP9.52□□□□□ -0.88
TDP1-211ENST00000555178 YTHDF1Q9BYJ9 559 aaKnown RBP9.52□□□□□ -0.88
TDP1-211ENST00000555178 C12orf49Q9H741 205 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 ADGRL4Q9HBW9 690 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 B9D1Q9UPM9 204 aa9.52□□□□□ -0.88
TDP1-211ENST00000555178 A6NIZ1 184 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 AHRRA9YTQ3 701 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 RGS10O43665 173 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 IGHG1P01857 330 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 TFP02787 698 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 GLI4P10075 376 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 CENPAP49450 140 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 SLC25A1P53007 311 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 RAP1BP61224 184 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 RAP1AP62834 184 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 NEDD8Q15843 81 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 EIF2S3LQ2VIR3 472 aaKnown RBP9.52□□□□□ -0.89
TDP1-211ENST00000555178 C1orf185Q5T7R7 199 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 NSUN5P2Q63ZY6 315 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 RFKQ969G6 155 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 ALKBH3Q96Q83 286 aaPredicted RBP9.52□□□□□ -0.89
TDP1-211ENST00000555178 WDR76Q9H967 626 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 OSGIN2Q9Y236 505 aa9.52□□□□□ -0.89
TDP1-211ENST00000555178 COA3Q9Y2R0 106 aaPredicted RBP9.52□□□□□ -0.89
TDP1-211ENST00000555178 IGKV3D-15A0A087WSY6 115 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 SLC22A31A6NKX4 558 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 ZNF726A6NNF4 738 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 M0R3G1 203 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 UPK3AO75631 287 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 SCG5P05408 212 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 PCMT1P22061 227 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 AGTR1P30556 359 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 CDAP32320 146 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 KIR2DL2P43627 348 aaPredicted RBP9.51□□□□□ -0.89
TDP1-211ENST00000555178 PMPCAQ10713 525 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 GUSBP1Q15486 140 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 XAF1Q6GPH4 301 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 LRFN4Q6PJG9 635 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 KCTD8Q6ZWB6 473 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 ZBTB46Q86UZ6 589 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 ST6GALNAC3Q8NDV1 305 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 TTYH2Q9BSA4 534 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 PAQR5Q9NXK6 330 aaPredicted RBP9.51□□□□□ -0.89
TDP1-211ENST00000555178 CNOT2Q9NZN8 540 aaKnown RBP9.51□□□□□ -0.89
TDP1-211ENST00000555178 KLHL9Q9P2J3 617 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 PRSS50Q9UI38 385 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 SCOCQ9UIL1 159 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 MYO18BQ8IUG5 2567 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 EFCAB10A6NFE3 127 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 J3QRE1 110 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 MAGEB4O15481 346 aaPredicted RBP9.51□□□□□ -0.89
TDP1-211ENST00000555178 SEC14L2O76054 403 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 GLCEO94923 617 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 PTHP01270 115 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 TFAP2AP05549 437 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 QDPRP09417 244 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 SBK2P0C263 348 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 PIPP12273 146 aaPredicted RBP9.51□□□□□ -0.89
TDP1-211ENST00000555178 GNLYP22749 145 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 ATP6V1E1P36543 226 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 ETV1P50549 477 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 EMX1Q04741 257 aaPredicted RBP9.51□□□□□ -0.89
TDP1-211ENST00000555178 CDSNQ15517 529 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 HIST3H3Q16695 136 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 FAM205BPQ63HN1 556 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 SSX6Q7RTT6 188 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 AAED1Q7RTV5 226 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 P4HA3Q7Z4N8 544 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 LHFPL3Q86UP9 236 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 ERI1Q8IV48 349 aaKnown RBP9.51□□□□□ -0.89
TDP1-211ENST00000555178 LIX1LQ8IVB5 337 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 OR2T4Q8NH00 348 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 IPCEF1Q8WWN9 437 aaPredicted RBP9.51□□□□□ -0.89
TDP1-211ENST00000555178 MCHR2Q969V1 340 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 MRPS26Q9BYN8 205 aaKnown RBP9.51□□□□□ -0.89
TDP1-211ENST00000555178 BCO1Q9HAY6 547 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 MRPL22Q9NWU5 206 aaKnown RBP9.51□□□□□ -0.89
TDP1-211ENST00000555178 WARS2Q9UGM6 360 aaKnown RBP9.51□□□□□ -0.89
TDP1-211ENST00000555178 FOXD3Q9UJU5 478 aaPredicted RBP9.51□□□□□ -0.89
TDP1-211ENST00000555178 COPS3Q9UNS2 423 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 KLHDC2Q9Y2U9 406 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 NOSIPQ9Y314 301 aaKnown RBP9.51□□□□□ -0.89
TDP1-211ENST00000555178 ZNF175Q9Y473 711 aa9.51□□□□□ -0.89
TDP1-211ENST00000555178 USP9XQ93008 2570 aaPredicted RBP9.5□□□□□ -0.89
TDP1-211ENST00000555178 A0A087WXM4 84 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 TRGV8A0A0C4DH27 118 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 MBD3L4A6NDZ8 208 aaPredicted RBP9.5□□□□□ -0.89
TDP1-211ENST00000555178 MBD3L3A6NE82 208 aaPredicted RBP9.5□□□□□ -0.89
TDP1-211ENST00000555178 MBD3L5A6NJ08 208 aaPredicted RBP9.5□□□□□ -0.89
TDP1-211ENST00000555178 CD8B2A6NJW9 211 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 TRIM64CA6NLI5 447 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 TNFSF13O75888 250 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 CLPTM1O96005 669 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms