RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 AIFM2Q9BRQ8 373 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 HDHD5Q9BXW7 423 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 OR2B2Q9GZK3 357 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 SRA1Q9HD15 236 aaKnown RBP7.95□□□□□ -1.14
TDP1-210ENST00000554976 HMG20AQ9NP66 347 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 SPAARA0A1B0GVQ0 90 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 A0A1W2PRG6 482 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 A6NIZ1 184 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 HSPB2A8KAH6 182 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 CTDSP2O14595 271 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 RFPL3SP0C7P2 107 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 SRD5A2P31213 254 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 DAP3P51398 398 aaKnown RBP7.95□□□□□ -1.14
TDP1-210ENST00000554976 SOX8P57073 446 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 RAP1BP61224 184 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 RAP1AP62834 184 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 SIRPAP78324 504 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 ROM1Q03395 351 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 POU4F3Q15319 338 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 HSPB2Q16082 182 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 TMEM164Q5U3C3 297 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 SLC35D2Q76EJ3 337 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 LURAP1LQ8IV03 231 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 PARP16Q8N5Y8 322 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 OR4K17Q8NGC6 315 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 LRFN3Q9BTN0 628 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 TTTY10Q9BZA0 68 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 PTGES2Q9H7Z7 377 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 SACM1LQ9NTJ5 587 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 ANKRD10Q9NXR5 420 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 PEX16Q9Y5Y5 336 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 A0A1W2PNR3 127 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 OR2M5A3KFT3 312 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 DPP4P27487 766 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 DNASE1L1P49184 302 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 PPP5CP53041 499 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 GFRA1P56159 465 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 TLE3Q04726 772 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 PRSS35Q8N3Z0 413 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 OR13C5Q8NGS8 318 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 HSD17B8Q92506 261 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 THOC3Q96J01 351 aaKnown RBP7.95□□□□□ -1.14
TDP1-210ENST00000554976 INTS14Q96SY0 518 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 GFI1Q99684 422 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 SNTG1Q9NSN8 517 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 RPH3AQ9Y2J0 694 aaPredicted RBP7.95□□□□□ -1.14
TDP1-210ENST00000554976 TNRC6AQ8NDV7 1962 aaKnown RBP7.94□□□□□ -1.14
TDP1-210ENST00000554976 TRBV5-5A0A0J9YX44 114 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 ANKRD61A6NGH8 418 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 TVP23AA6NH52 213 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 FAM25EA8MYX2 175 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 G3V3Y1 287 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 SEC14L5O43304 696 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 UCHL1P09936 223 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 CSRP1P21291 193 aaKnown RBP7.94□□□□□ -1.14
TDP1-210ENST00000554976 CNR1P21554 472 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 SOX6P35712 828 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 SUCLG1P53597 346 aaKnown RBP7.94□□□□□ -1.14
TDP1-210ENST00000554976 P2RX3P56373 397 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 CLDN15P56746 228 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 FMODQ06828 376 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 HNRNPA0Q13151 305 aaKnown RBP7.94□□□□□ -1.14
TDP1-210ENST00000554976 ZNF79Q15937 498 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 TMPPEQ6ZT21 453 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 FOXL2NBQ6ZUU3 175 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 KCTD20Q7Z5Y7 419 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 RAB43Q86YS6 212 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 MDS2Q8NDY4 140 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 ST7LQ8TDW4 575 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 GHSRQ92847 366 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 SIGLEC12Q96PQ1 595 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 KCNS3Q9BQ31 491 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 EXOSC4Q9NPD3 245 aaKnown RBP7.94□□□□□ -1.14
TDP1-210ENST00000554976 FAM86C1Q9NVL1 165 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 MED29Q9NX70 200 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 FRRS1LQ9P0K9 344 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 ZSCAN5BA6NJL1 495 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 B8ZZF3 427 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 PIN1P1O15428 100 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 HRGP04196 525 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 AHCYP23526 432 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 CD96P40200 585 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 GDI2P50395 445 aaKnown RBP7.94□□□□□ -1.14
TDP1-210ENST00000554976 GNG2P59768 71 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 B2MP61769 119 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 GABREP78334 506 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 ZNF45Q02386 682 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 POU3F1Q03052 451 aaPredicted RBP7.94□□□□□ -1.14
TDP1-210ENST00000554976 FAM27D1Q5T7N8 215 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 SLC25A47Q6Q0C1 308 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 LAX1Q8IWV1 398 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 TMEM156Q8N614 296 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 NOXO1Q8NFA2 376 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 KLHL15Q96M94 604 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 OXGR1Q96P68 337 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 SRXN1Q9BYN0 137 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 KCNN3Q9UGI6 736 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 KCNG2Q9UJ96 466 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 GNG8Q9UK08 70 aa7.94□□□□□ -1.14
TDP1-210ENST00000554976 UGT2A1Q9Y4X1 527 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms