RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 C10orf128Q5T292 105 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 SMARCD3Q6STE5 483 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 SLC22A25Q6T423 547 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 KLHL17Q6TDP4 642 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 TMEM108Q6UXF1 575 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 ASRGL1Q7L266 308 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 KRTAP1-3Q8IUG1 177 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 SLC22A24Q8N4F4 322 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 ARIH2OSQ8N7S6 290 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 AQP11Q8NBQ7 271 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 OR8D4Q8NGM9 314 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 FANK1Q8TC84 345 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 GNPDA2Q8TDQ7 276 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 NABP1Q96AH0 204 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 SAMD8Q96LT4 415 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 ZNF570Q96NI8 536 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 SLC38A2Q96QD8 506 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 GPX7Q96SL4 187 aaPredicted RBP10.74□□□□□ -0.69
SYNE2-214ENST00000554928 PLA2G12AQ9BZM1 189 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 EGLN3Q9H6Z9 239 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 OBP2BQ9NPH6 170 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 NRIP3Q9NQ35 241 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 SLC22A23A1A5C7 686 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 SOCS2O14508 198 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 ATP5HO75947 161 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 CCNB2O95067 398 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 CST1P01037 141 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 IGKV3-15P01624 115 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 CD8AP01732 235 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 TP53P04637 393 aaPredicted RBP10.73□□□□□ -0.69
SYNE2-214ENST00000554928 DANCRP0C864 163 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 CBR1P16152 277 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 CDKN2AP42771 156 aaKnown RBP10.73□□□□□ -0.69
SYNE2-214ENST00000554928 GIPRP48546 466 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 NAAAQ02083 359 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 TSPAN31Q12999 210 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 KRR1Q13601 381 aaKnown RBP10.73□□□□□ -0.69
SYNE2-214ENST00000554928 TAF11Q15544 211 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 DEFB113Q30KQ7 82 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 RFX4Q33E94 735 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 ZNF620Q6ZNG0 422 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 ZNF584Q8IVC4 421 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 ZNF611Q8N823 705 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 NINJ1Q92982 152 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 GTPBP3Q969Y2 492 aaKnown RBP10.73□□□□□ -0.69
SYNE2-214ENST00000554928 RADILQ96JH8 1075 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 CCL19Q99731 98 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 NIPSNAP1Q9BPW8 284 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 ALG12Q9BV10 488 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 REEP1Q9H902 201 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 CISD1Q9NZ45 108 aaKnown RBP10.73□□□□□ -0.69
SYNE2-214ENST00000554928 GRHPRQ9UBQ7 328 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 LAMP3Q9UQV4 416 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 MAGED1Q9Y5V3 778 aaPredicted RBP10.73□□□□□ -0.69
SYNE2-214ENST00000554928 ATP23Q9Y6H3 246 aa10.73□□□□□ -0.69
SYNE2-214ENST00000554928 PRRC2AP48634 2157 aaKnown RBP10.73□□□□□ -0.69
SYNE2-214ENST00000554928 PRSS37A4D1T9 235 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 A6NIZ1 184 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 CENPBD1B2RD01 187 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 TIPRLO75663 272 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 SOX14O95416 240 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 STAMBPO95630 424 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 GPANK1O95872 356 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 CTLA4P16410 223 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 SDHAP31040 664 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 PTDSS1P48651 473 aaKnown RBP10.72□□□□□ -0.69
SYNE2-214ENST00000554928 RAP1BP61224 184 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 RAP1AP62834 184 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 HGFACQ04756 655 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 RAB39AQ14964 217 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 MICAQ29983 383 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 CLEC12AQ5QGZ9 265 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 UGT2A3Q6UWM9 527 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 DPY19L2P2Q6ZN68 376 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 C20orf204Q6ZNR8 217 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 HDDC2Q7Z4H3 204 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 LRRC18Q8N456 261 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 PAPD5Q8NDF8 572 aaKnown RBP10.72□□□□□ -0.69
SYNE2-214ENST00000554928 OR10G2Q8NGC3 310 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 SMAP2Q8WU79 429 aaPredicted RBP10.72□□□□□ -0.69
SYNE2-214ENST00000554928 FBXW5Q969U6 566 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 MBD6Q96DN6 1003 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 TSSK2Q96PF2 358 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 ERMAPQ96PL5 475 aaPredicted RBP10.72□□□□□ -0.69
SYNE2-214ENST00000554928 NTN4Q9HB63 628 aa10.72□□□□□ -0.69
SYNE2-214ENST00000554928 KRCC1Q9NPI7 259 aaPredicted RBP10.72□□□□□ -0.69
SYNE2-214ENST00000554928 IGHV2OR16-5A0A0B4J2B6 119 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 DCTN6O00399 190 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 MPZL1O95297 269 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 TXNDC12O95881 172 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 MMP7P09237 267 aaPredicted RBP10.71□□□□□ -0.69
SYNE2-214ENST00000554928 OR8G3PP0DMU2 310 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 HIST1H1CP16403 213 aaKnown RBP10.71□□□□□ -0.69
SYNE2-214ENST00000554928 ZNF14P17017 642 aaPredicted RBP10.71□□□□□ -0.69
SYNE2-214ENST00000554928 PRKACGP22612 351 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 CDKN1AP38936 164 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 PRSS12P56730 875 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 RAB1AP62820 205 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 SGCAQ16586 387 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 MSMPQ1L6U9 139 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms