RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 LRRC18Q8N456 261 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 FITM2Q8N6M3 262 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 IL17RDQ8NFM7 739 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 OR4K5Q8NGD3 323 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 OR52J3Q8NH60 311 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 SLC7A13Q8TCU3 470 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 PYURFQ96I23 114 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 COX4I2Q96KJ9 171 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 VRK1Q99986 396 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-213ENST00000554600 KCNN2Q9H2S1 579 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 ANKRD19PQ9H560 264 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 GORASP2Q9H8Y8 452 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 KRCC1Q9NPI7 259 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-213ENST00000554600 B3GNT2Q9NY97 397 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 NDUFAF4Q9P032 175 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 ZNF346Q9UL40 294 aaKnown RBP9.25□□□□□ -0.93
SHMT2-213ENST00000554600 TRBV4-1A0A0J9YWV2 114 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 SH3PXD2BA1X283 911 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 A6NIZ1 184 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 FAM171A2A8MVW0 826 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 CENPBD1B2RD01 187 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 RNF223E7ERA6 249 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 LY6G6DO95868 133 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 NPR2P20594 1047 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 THBS4P35443 961 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 GUCA1AP43080 201 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-213ENST00000554600 SMIM11AP58511 58 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 RAP1BP61224 184 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 RAP1AP62834 184 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 ERVK-25P63136 954 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 HSF2Q03933 536 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 HGFACQ04756 655 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 FMODQ06828 376 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 TAF11Q15544 211 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 ANKDD1AQ495B1 522 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 SLC36A2Q495M3 483 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 ZBED5Q49AG3 693 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 ARMC4Q5T2S8 1044 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 CLEC2AQ6UVW9 174 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 CYP2R1Q6VVX0 501 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 TSEN54Q7Z6J9 526 aaKnown RBP9.24□□□□□ -0.93
SHMT2-213ENST00000554600 MAPK1IP1LQ8NDC0 245 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 FGFBP3Q8TAT2 258 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 HDAC2Q92769 488 aaKnown RBP9.24□□□□□ -0.93
SHMT2-213ENST00000554600 C7orf34Q96L11 122 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 RBP7Q96R05 134 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 RHNO1Q9BSD3 238 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 MRPL13Q9BYD1 178 aaKnown RBP9.24□□□□□ -0.93
SHMT2-213ENST00000554600 DENND2DQ9H6A0 471 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-213ENST00000554600 CDH20Q9HBT6 801 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 CCNB1IP1Q9NPC3 277 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 ZNF224Q9NZL3 707 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 GRHPRQ9UBQ7 328 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 CD300AQ9UGN4 299 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 FBXL3Q9UKT7 428 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 SPEF1Q9Y4P9 236 aa9.24□□□□□ -0.93
SHMT2-213ENST00000554600 JMJD1CQ15652 2540 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 A0A1W2PPL8 197 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 A0A1W2PRQ8 180 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 NPIPB13A6NJU9 1138 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 B9A039 149 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 NPIPB4C9JG80 1138 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 H7C1C5 153 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 H7C417 338 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 XKRYO14609 159 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 CDC42EP2O14613 210 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 GADD45GO95257 159 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 FABP3P05413 133 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 TSPAN19P0C672 248 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 ZNF14P17017 642 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-213ENST00000554600 CDAP32320 146 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 LCN6P62502 163 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 PLP2Q04941 152 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 DGCR6Q14129 220 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 ADIPOQQ15848 244 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 CARTPTQ16568 116 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 SPATS1Q496A3 300 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 C10orf128Q5T292 105 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 FAM205BPQ63HN1 556 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 RINLQ6ZS11 566 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 TMPRSS11FQ6ZWK6 438 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 SVOPLQ8N434 492 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 CLDN22Q8N7P3 220 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 NUP37Q8NFH4 326 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 RSRC1Q96IZ7 334 aaKnown RBP9.23□□□□□ -0.93
SHMT2-213ENST00000554600 ZNF570Q96NI8 536 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 TSPAN32Q96QS1 320 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 KCNK17Q96T54 332 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 SEPHS2Q99611 448 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 ALG12Q9BV10 488 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 REG4Q9BYZ8 158 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 OR51B6Q9H340 312 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 DYNLRB1Q9NP97 96 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 ADAM18Q9Y3Q7 739 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 CMAHPQ9Y471 501 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 FKBP7Q9Y680 259 aa9.23□□□□□ -0.93
SHMT2-213ENST00000554600 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.23□□□□□ -0.932e-7■■■■■ 34.4
SHMT2-213ENST00000554600 FN1P02751 2386 aaKnown RBP9.23□□□□□ -0.93
SHMT2-213ENST00000554600 IGKV1D-43A0A0B4J1Z2 117 aa9.22□□□□□ -0.93
SHMT2-213ENST00000554600 IQCMA0A1B0GVH7 501 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms