RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 VSX1Q9NZR4 365 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-206ENST00000553888 KLHL13Q9P2N7 655 aa11.41□□□□□ -0.58
VIPAS39-206ENST00000553888 RTTNQ86VV8 2226 aa11.41□□□□□ -0.58
VIPAS39-206ENST00000553888 OGG1O15527 345 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 SPARCP09486 303 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 CHAF1BQ13112 559 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 SRSF6Q13247 344 aaKnown RBP11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 GPR50Q13585 617 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 LIPNQ5VXI9 398 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 CARD17Q5XLA6 110 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 LRRN1Q6UXK5 716 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 YRDCQ86U90 279 aaKnown RBP11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 DTX3Q8N9I9 347 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 ZNF248Q8NDW4 579 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 ABTB1Q969K4 478 aaPredicted RBP11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 MED18Q9BUE0 208 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 HES7Q9BYE0 225 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 POTEKPQ9BYX7 375 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 SLCO1C1Q9NYB5 712 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 DKKL1Q9UK85 242 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 PCDHGA1Q9Y5H4 931 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 PTPRBP23467 1997 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 DCHS1Q96JQ0 3298 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 OR2M5A3KFT3 312 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 FAM47E-STBD1D6RA91 191 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 UPK3AO75631 287 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 SERPINA7P05543 415 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 FTH1P19P0C7X4 201 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 CAMK2DQ13557 499 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 FAM209AQ5JX71 171 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 TIGD3Q6B0B8 471 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 DCDC5Q6ZRR9 648 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 SCAIQ8N9R8 606 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 RGP1Q92546 391 aaPredicted RBP11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 PPP1R14AQ96A00 147 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 ATF6BQ99941 703 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 B3GNT4Q9C0J1 378 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 B3GAT2Q9NPZ5 323 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 CRNNQ9UBG3 495 aaPredicted RBP11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 MALT1Q9UDY8 824 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 DAPK2Q9UIK4 370 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 CMAHPQ9Y471 501 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 ZNF407Q9C0G0 2248 aa11.4□□□□□ -0.58
VIPAS39-206ENST00000553888 DNAJC13O75165 2243 aa11.4□□□□□ -0.59
VIPAS39-206ENST00000553888 IQCMA0A1B0GVH7 501 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 ANKRD61A6NGH8 418 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 DOK2O60496 412 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 SC5DO75845 299 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 ZFPL1O95159 310 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 ABHD16AO95870 558 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 ALOX5APP20292 161 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 TAS2R43P59537 309 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 ADAM8P78325 824 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 ZP4Q12836 540 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 STEAP3Q658P3 488 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 LINC00346Q8IVM7 164 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 RDH10Q8IZV5 341 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 ARMC10Q8N2F6 343 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 SLC30A2Q9BRI3 323 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 STMN3Q9NZ72 180 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 FKBP7Q9Y680 259 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 V9GYH0 126 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 PRRC2CQ9Y520 2896 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 ACOD1A6NK06 481 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 HPGDSO60760 199 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 SELENBP1Q13228 472 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 EIF3IQ13347 325 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 RGS21Q2M5E4 152 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 SLC25A35Q3KQZ1 300 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 SPANXN2Q5MJ10 180 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 H3F3CQ6NXT2 135 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 Q6ZNX1 250 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 IL22RA1Q8N6P7 574 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 NTNG2Q96CW9 530 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 KLHL15Q96M94 604 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 UCN2Q96RP3 112 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 KCNK17Q96T54 332 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 PALMDQ9NP74 551 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 PLA2G3Q9NZ20 509 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 POLHQ9Y253 713 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 SULT2B1O00204 365 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 UPK1BO75841 260 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 P04436 131 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 CD63P08962 238 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 SLC2A2P11168 524 aaPredicted RBP11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 ICAM2P13598 275 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 GABREP78334 506 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 ZNF79Q15937 498 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 IDNKQ5T6J7 187 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 CORO6Q6QEF8 472 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 NHLRC1Q6VVB1 395 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 LYSMD2Q8IV50 215 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 GTPBP8Q8N3Z3 284 aaPredicted RBP11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 OR10AC1Q8NH08 325 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 OR6S1Q8NH40 331 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 SIGLEC12Q96PQ1 595 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 FRRS1LQ9P0K9 344 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 B3GNT3Q9Y2A9 372 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 B3GALT5Q9Y2C3 310 aa11.39□□□□□ -0.59
VIPAS39-206ENST00000553888 NCOA6Q14686 2063 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms